RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TYRO3Q06418 890 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 PAK2Q13177 524 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 GRM2Q14416 872 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 MAP3K11Q16584 847 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 CCDC144BQ3MJ40 725 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 SOGA3Q5TF21 947 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 GIMAP6Q6P9H5 292 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 DTHD1Q6ZMT9 781 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 RIPOR1Q6ZS17 1223 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 NOP9Q86U38 636 aaKnown RBP3.39□□□□□ -1.87
GABPB1-209ENST00000559100 NLRP13Q86W25 1043 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 RELL1Q8IUW5 271 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 GALNT12Q8IXK2 581 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 C7orf43Q8WVR3 580 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 SUV39H2Q9H5I1 410 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 COPRSQ9NQ92 184 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 KBTBD4Q9NVX7 518 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 CUEDC1Q9NWM3 386 aaPredicted RBP3.39□□□□□ -1.87
GABPB1-209ENST00000559100 CNTN3Q9P232 1028 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 AKAP2Q9Y2D5 859 aa3.39□□□□□ -1.87
GABPB1-209ENST00000559100 ANKRD62A6NC57 917 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 MINDY4BA8MYZ0 360 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 FBXO24O75426 580 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 RARAP10276 462 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 LMNB1P20700 586 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 PTPN12Q05209 780 aaKnown RBP3.38□□□□□ -1.87
GABPB1-209ENST00000559100 PWP1Q13610 501 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 BMS1Q14692 1282 aaKnown RBP3.38□□□□□ -1.87
GABPB1-209ENST00000559100 WDR44Q5JSH3 913 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 EFHC2Q5JST6 749 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 MRPL14Q6P1L8 145 aaKnown RBP3.38□□□□□ -1.87
GABPB1-209ENST00000559100 LYPD4Q6UWN0 246 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 NCAPG2Q86XI2 1143 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 MCF2L2Q86YR7 1114 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 KIAA0825Q8IV33 1275 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 CKAP2LQ8IYA6 745 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 CPLX3Q8WVH0 158 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 ARMC5Q96C12 935 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 SPON2Q9BUD6 331 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 OXCT2Q9BYC2 517 aaPredicted RBP3.38□□□□□ -1.87
GABPB1-209ENST00000559100 CHRDQ9H2X0 955 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 LIN7BQ9HAP6 207 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 SRA1Q9HD15 236 aaKnown RBP3.38□□□□□ -1.87
GABPB1-209ENST00000559100 LATS2Q9NRM7 1088 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 KCNH4Q9UQ05 1017 aa3.38□□□□□ -1.87
GABPB1-209ENST00000559100 KHNYNO15037 678 aaKnown RBP3.37□□□□□ -1.87
GABPB1-209ENST00000559100 U2SURPO15042 1029 aaKnown RBP3.37□□□□□ -1.87
GABPB1-209ENST00000559100 F11P03951 625 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 CYP2E1P05181 493 aaPredicted RBP3.37□□□□□ -1.87
GABPB1-209ENST00000559100 PSAPP07602 524 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 JAG1P78504 1218 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 CCINQ13939 588 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 TPTE2Q6XPS3 522 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 ERMP1Q7Z2K6 904 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 GMLQ99445 158 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 TRIM55Q9BYV6 548 aa3.37□□□□□ -1.87
GABPB1-209ENST00000559100 ZCCHC2Q9C0B9 1178 aaKnown RBP3.37□□□□□ -1.87
GABPB1-209ENST00000559100 R3HCC1Q9Y3T6 440 aaKnown RBP3.37□□□□□ -1.87
GABPB1-209ENST00000559100 A0A1W2PP55 124 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 DCDC2BA2VCK2 349 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 ATXN7O15265 892 aaPredicted RBP3.36□□□□□ -1.87
GABPB1-209ENST00000559100 ATF4P18848 351 aaPredicted RBP3.36□□□□□ -1.87
GABPB1-209ENST00000559100 TARSP26639 723 aaKnown RBP3.36□□□□□ -1.87
GABPB1-209ENST00000559100 HYAL2Q12891 473 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 SNAP47Q5SQN1 464 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 KIAA0319Q5VV43 1072 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 DIEXFQ68CQ4 756 aaKnown RBP3.36□□□□□ -1.87
GABPB1-209ENST00000559100 FIGNL1Q6PIW4 674 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 NLRP8Q86W28 1048 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 ASAP3Q8TDY4 903 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 MRFAP1L1Q96HT8 127 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 SPACA7Q96KW9 195 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 NOC4LQ9BVI4 516 aaKnown RBP3.36□□□□□ -1.87
GABPB1-209ENST00000559100 OSBPL2Q9H1P3 480 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 IGFLR1Q9H665 355 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 ENAMQ9NRM1 1142 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 EFR3BQ9Y2G0 817 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 DYRK1BQ9Y463 629 aa3.36□□□□□ -1.87
GABPB1-209ENST00000559100 TMEM238LA0A1B0GVL6 79 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 TLDC2A0PJX2 215 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 MAN1A2O60476 641 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 MMP20O60882 483 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 CLSTN1O94985 981 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 EGFRP00533 1210 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 FGRP09769 529 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 RLBP1P12271 317 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 XRCC5P13010 732 aaKnown RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 NFKB1P19838 968 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 EIF4A3P38919 411 aaKnown RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 GJA8P48165 433 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 NASPP49321 788 aaPredicted RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 FAM160A1Q05DH4 1040 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 TBC1D8BQ0IIM8 1120 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 SFSWAPQ12872 951 aaKnown RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 NFE2L2Q16236 605 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 FBXW10Q5XX13 1052 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 SV2BQ7L1I2 683 aa3.35□□□□□ -1.87
GABPB1-209ENST00000559100 ZNF296Q8WUU4 475 aaPredicted RBP3.35□□□□□ -1.87
GABPB1-209ENST00000559100 BHMTQ93088 406 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms