RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCDC158Q5M9N0 1113 aa22.1■■□□□ 1.13
CLPX-203ENST00000558958 CC2D2BQ6DHV5 1058 aa22.1■■□□□ 1.13
CLPX-203ENST00000558958 MPNDQ8N594 471 aa22.1■■□□□ 1.13
CLPX-203ENST00000558958 LTBP1Q14766 1721 aa22.1■■□□□ 1.13
CLPX-203ENST00000558958 UFL1O94874 794 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 GSPT1P15170 499 aaKnown RBP22.09■■□□□ 1.13
CLPX-203ENST00000558958 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 TBC1D16Q8TBP0 767 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 POLLQ9UGP5 575 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 IRS2Q9Y4H2 1338 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 KLRK1P26718 216 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
CLPX-203ENST00000558958 BMP2KLQ5H9B9 411 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 CCDC102BQ68D86 513 aa22.09■■□□□ 1.13
CLPX-203ENST00000558958 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
CLPX-203ENST00000558958 C15orf52Q6ZUT6 534 aaKnown RBP22.09■■□□□ 1.13
CLPX-203ENST00000558958 FHDC1Q9C0D6 1143 aaPredicted RBP22.09■■□□□ 1.13
CLPX-203ENST00000558958 ZNF219Q9P2Y4 722 aaPredicted RBP22.09■■□□□ 1.13
CLPX-203ENST00000558958 BRCA1P38398 1863 aaKnown RBP22.08■■□□□ 1.12
CLPX-203ENST00000558958 C21orf2O43822 256 aa22.08■■□□□ 1.12
CLPX-203ENST00000558958 PHKA1P46020 1223 aa22.08■■□□□ 1.12
CLPX-203ENST00000558958 ZNF512BQ96KM6 892 aaPredicted RBP22.08■■□□□ 1.12
CLPX-203ENST00000558958 SNED1Q8TER0 1413 aa22.07■■□□□ 1.12
CLPX-203ENST00000558958 BCAMP50895 628 aa22.07■■□□□ 1.12
CLPX-203ENST00000558958 GRIPAP1Q4V328 841 aa22.07■■□□□ 1.12
CLPX-203ENST00000558958 TTC39AQ5SRH9 613 aa22.07■■□□□ 1.12
CLPX-203ENST00000558958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLPX-203ENST00000558958 FAM84BQ96KN1 310 aaPredicted RBP22.07■■□□□ 1.12
CLPX-203ENST00000558958 DUOX1Q9NRD9 1551 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 C6orf229H3BNL8 230 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 GYG1P46976 350 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 CAVIN4Q5BKX8 364 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 FBXO33Q7Z6M2 555 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 TXNRD3Q86VQ6 643 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 BOLA2Q9H3K6 86 aa22.06■■□□□ 1.12
CLPX-203ENST00000558958 ARID4AP29374 1257 aaPredicted RBP22.05■■□□□ 1.12
CLPX-203ENST00000558958 GPR101Q96P66 508 aaPredicted RBP22.05■■□□□ 1.12
CLPX-203ENST00000558958 RTFDC1Q9BY42 306 aaPredicted RBP22.05■■□□□ 1.12
CLPX-203ENST00000558958 UQCRFS1P1P0C7P4 283 aa22.04■■□□□ 1.12
CLPX-203ENST00000558958 CCDC93Q567U6 631 aa22.04■■□□□ 1.12
CLPX-203ENST00000558958 SOGA3Q5TF21 947 aa22.04■■□□□ 1.12
CLPX-203ENST00000558958 HAUS7Q99871 368 aa22.04■■□□□ 1.12
CLPX-203ENST00000558958 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
CLPX-203ENST00000558958 MED23Q9ULK4 1368 aa22.04■■□□□ 1.12
CLPX-203ENST00000558958 SDSP20132 328 aa22.03■■□□□ 1.12
CLPX-203ENST00000558958 HIBADHP31937 336 aaKnown RBP22.03■■□□□ 1.12
CLPX-203ENST00000558958 RTKN2Q8IZC4 609 aa22.03■■□□□ 1.12
CLPX-203ENST00000558958 MCAMP43121 646 aa22.03■■□□□ 1.12
CLPX-203ENST00000558958 SCARF1Q14162 830 aa22.03■■□□□ 1.12
CLPX-203ENST00000558958 VPS37DQ86XT2 251 aa22.03■■□□□ 1.12
CLPX-203ENST00000558958 SYT17Q9BSW7 474 aa22.03■■□□□ 1.12
CLPX-203ENST00000558958 GNL3LQ9NVN8 582 aaKnown RBP22.03■■□□□ 1.12
CLPX-203ENST00000558958 EYA3Q99504 573 aa22.02■■□□□ 1.12
CLPX-203ENST00000558958 BCS1LQ9Y276 419 aa22.02■■□□□ 1.12
CLPX-203ENST00000558958 GOLGB1Q14789 3259 aaKnown RBP22.01■■□□□ 1.11
CLPX-203ENST00000558958 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
CLPX-203ENST00000558958 TRIM6-TRIM34B2RNG4 842 aa22.01■■□□□ 1.11
CLPX-203ENST00000558958 ZBTB22O15209 634 aa22.01■■□□□ 1.11
CLPX-203ENST00000558958 MAP4K4O95819 1239 aaPredicted RBP22.01■■□□□ 1.11
CLPX-203ENST00000558958 RASGRF1Q13972 1273 aa22.01■■□□□ 1.11
CLPX-203ENST00000558958 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
CLPX-203ENST00000558958 NDUFB9Q9Y6M9 179 aa22.01■■□□□ 1.11
CLPX-203ENST00000558958 WASHC4Q2M389 1173 aa22■■□□□ 1.11
CLPX-203ENST00000558958 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
CLPX-203ENST00000558958 SUPT20HQ8NEM7 779 aa22■■□□□ 1.11
CLPX-203ENST00000558958 PSMD1Q99460 953 aa22■■□□□ 1.11
CLPX-203ENST00000558958 DNAJC2Q99543 621 aaKnown RBP22■■□□□ 1.11
CLPX-203ENST00000558958 ZC3H12CQ9C0D7 883 aaKnown RBP22■■□□□ 1.11
CLPX-203ENST00000558958 HMG20BQ9P0W2 317 aa22■■□□□ 1.11
CLPX-203ENST00000558958 PI16Q6UXB8 463 aa21.99■■□□□ 1.11
CLPX-203ENST00000558958 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
CLPX-203ENST00000558958 SPATA5Q8NB90 893 aa21.99■■□□□ 1.11
CLPX-203ENST00000558958 RILPL2Q969X0 211 aa21.99■■□□□ 1.11
CLPX-203ENST00000558958 EVI5LQ96CN4 794 aa21.99■■□□□ 1.11
CLPX-203ENST00000558958 SNRKQ9NRH2 765 aa21.99■■□□□ 1.11
CLPX-203ENST00000558958 RIMBP2O15034 1052 aa21.98■■□□□ 1.11
CLPX-203ENST00000558958 SEMA3EO15041 775 aa21.98■■□□□ 1.11
CLPX-203ENST00000558958 ZAP70P43403 619 aa21.98■■□□□ 1.11
CLPX-203ENST00000558958 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLPX-203ENST00000558958 EDC3Q96F86 508 aaKnown RBP21.98■■□□□ 1.11
CLPX-203ENST00000558958 PAG1Q9NWQ8 432 aa21.98■■□□□ 1.11
CLPX-203ENST00000558958 IQSEC3Q9UPP2 1182 aaPredicted RBP21.98■■□□□ 1.11
CLPX-203ENST00000558958 AKAP11Q9UKA4 1901 aa21.98■■□□□ 1.11
CLPX-203ENST00000558958 TDRD7Q8NHU6 1098 aaKnown RBP21.97■■□□□ 1.11
CLPX-203ENST00000558958 CD209Q9NNX6 404 aa21.97■■□□□ 1.11
CLPX-203ENST00000558958 DENND2AQ9ULE3 1009 aa21.97■■□□□ 1.11
CLPX-203ENST00000558958 GOLIM4O00461 696 aa21.96■■□□□ 1.11
CLPX-203ENST00000558958 IL1R1P14778 569 aa21.96■■□□□ 1.11
CLPX-203ENST00000558958 COA1Q9GZY4 146 aa21.96■■□□□ 1.11
CLPX-203ENST00000558958 PDS5AQ29RF7 1337 aaKnown RBP21.96■■□□□ 1.11
CLPX-203ENST00000558958 ANTXR1Q9H6X2 564 aa21.96■■□□□ 1.11
CLPX-203ENST00000558958 COL1A1P02452 1464 aaPredicted RBP21.95■■□□□ 1.1
CLPX-203ENST00000558958 ARFGEF1Q9Y6D6 1849 aa21.95■■□□□ 1.1
CLPX-203ENST00000558958 FRAT2O75474 233 aaPredicted RBP21.95■■□□□ 1.1
CLPX-203ENST00000558958 CYP2E1P05181 493 aaPredicted RBP21.95■■□□□ 1.1
CLPX-203ENST00000558958 KIAA2012Q0VF49 1180 aa21.95■■□□□ 1.1
CLPX-203ENST00000558958 CDC45O75419 566 aa21.94■■□□□ 1.1
CLPX-203ENST00000558958 KBTBD3Q8NAB2 608 aa21.94■■□□□ 1.1
CLPX-203ENST00000558958 VPS33BQ9H267 617 aa21.94■■□□□ 1.1
CLPX-203ENST00000558958 FER1L6Q2WGJ9 1857 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 496.9 ms