RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 EIF5P55010 431 aaKnown RBP8.16□□□□□ -1.1
MARK3-216ENST00000558953 SCARF1Q14162 830 aa8.16□□□□□ -1.1
MARK3-216ENST00000558953 NFIXQ14938 502 aa8.16□□□□□ -1.1
MARK3-216ENST00000558953 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
MARK3-216ENST00000558953 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
MARK3-216ENST00000558953 RTF1Q92541 710 aaKnown RBP8.16□□□□□ -1.1
MARK3-216ENST00000558953 NRXN2Q9P2S2 1712 aa8.16□□□□□ -1.1
MARK3-216ENST00000558953 ADAMTS8Q9UP79 889 aa8.16□□□□□ -1.1
MARK3-216ENST00000558953 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
MARK3-216ENST00000558953 HTATSF1O43719 755 aaKnown RBP8.15□□□□□ -1.1
MARK3-216ENST00000558953 SERPINB2P05120 415 aa8.15□□□□□ -1.1
MARK3-216ENST00000558953 NEFMP07197 916 aa8.15□□□□□ -1.1
MARK3-216ENST00000558953 CHRNA5P30532 468 aa8.15□□□□□ -1.1
MARK3-216ENST00000558953 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.1
MARK3-216ENST00000558953 HIC1Q14526 733 aa8.15□□□□□ -1.1
MARK3-216ENST00000558953 NPM2Q86SE8 214 aaKnown RBP8.15□□□□□ -1.1
MARK3-216ENST00000558953 DLEC1Q9Y238 1755 aa8.15□□□□□ -1.11
MARK3-216ENST00000558953 SCN7AQ01118 1682 aa8.14□□□□□ -1.11
MARK3-216ENST00000558953 DLG5Q8TDM6 1919 aa8.14□□□□□ -1.11
MARK3-216ENST00000558953 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
MARK3-216ENST00000558953 DNMT3AQ9Y6K1 912 aaPredicted RBP8.14□□□□□ -1.11
MARK3-216ENST00000558953 SBF1O95248 1867 aa8.14□□□□□ -1.11
MARK3-216ENST00000558953 KCNQ3O43525 872 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 A1BGP04217 495 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 SNRPA1P09661 255 aaKnown RBP8.13□□□□□ -1.11
MARK3-216ENST00000558953 C9orf131Q5VYM1 1079 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 MCM10Q7L590 875 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 NLRP7Q8WX94 980 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 PURBQ96QR8 312 aaKnown RBP8.13□□□□□ -1.11
MARK3-216ENST00000558953 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
MARK3-216ENST00000558953 H0YIN7 160 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 GPR37O15354 613 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 TAF7Q15545 349 aaPredicted RBP8.12□□□□□ -1.11
MARK3-216ENST00000558953 TBC1D9BQ66K14 1250 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 C2CD5Q86YS7 1000 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 TTLL6Q8N841 843 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 PNNQ9H307 717 aaKnown RBP8.12□□□□□ -1.11
MARK3-216ENST00000558953 USP16Q9Y5T5 823 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 ANKRD31Q8N7Z5 1873 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 BCORQ6W2J9 1755 aa8.12□□□□□ -1.11
MARK3-216ENST00000558953 CARMIL3Q8ND23 1372 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 TULP1O00294 542 aaPredicted RBP8.11□□□□□ -1.11
MARK3-216ENST00000558953 CAMTA2O94983 1202 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 HSPA6P17066 643 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 PDE6BP35913 854 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 DCTN1Q14203 1278 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 PRR5LQ6MZQ0 368 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
MARK3-216ENST00000558953 PNISRQ8TF01 805 aaKnown RBP8.11□□□□□ -1.11
MARK3-216ENST00000558953 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 BRIP1Q9BX63 1249 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 RNF181Q9P0P0 153 aa8.11□□□□□ -1.11
MARK3-216ENST00000558953 LAMB4A4D0S4 1761 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 KDM3BQ7LBC6 1761 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 KDM2BQ8NHM5 1336 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 PRAMEF22A3QJZ6 481 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 ZMYND10O75800 440 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 TOMM70O94826 608 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 FOXK2Q01167 660 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 RALBP1Q15311 655 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 SMYD5Q6GMV2 418 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 CLEC4GQ6UXB4 293 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 NMRK2Q9NPI5 230 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 ZNF652Q9Y2D9 606 aa8.1□□□□□ -1.11
MARK3-216ENST00000558953 MAPK8IP3Q9UPT6 1336 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 ZC3H4Q9UPT8 1303 aaKnown RBP8.09□□□□□ -1.11
MARK3-216ENST00000558953 NPHP1O15259 732 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 LMNB1P20700 586 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 PIP4K2AP48426 406 aaPredicted RBP8.09□□□□□ -1.11
MARK3-216ENST00000558953 ST5P78524 1137 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 NFE2L2Q16236 605 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
MARK3-216ENST00000558953 NBPF15Q8N660 670 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 ZNF622Q969S3 477 aaKnown RBP eCLIP8.09□□□□□ -1.11
MARK3-216ENST00000558953 PLEKHF1Q96S99 279 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 MIS18AQ9NYP9 233 aa8.09□□□□□ -1.11
MARK3-216ENST00000558953 COL11A2P13942 1736 aaPredicted RBP8.09□□□□□ -1.11
MARK3-216ENST00000558953 CACNA1SQ13698 1873 aa8.09□□□□□ -1.12
MARK3-216ENST00000558953 TNRC6CQ9HCJ0 1690 aaKnown RBP8.08□□□□□ -1.12
MARK3-216ENST00000558953 DICER1Q9UPY3 1922 aaKnown RBP8.08□□□□□ -1.12
MARK3-216ENST00000558953 MAN1A2O60476 641 aa8.08□□□□□ -1.12
MARK3-216ENST00000558953 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
MARK3-216ENST00000558953 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
MARK3-216ENST00000558953 FER1L6Q2WGJ9 1857 aa8.08□□□□□ -1.12
MARK3-216ENST00000558953 ARFGEF2Q9Y6D5 1785 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 TIAM2Q8IVF5 1701 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 SRGNP10124 158 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 IRS1P35568 1242 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 KRT76Q01546 638 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 PTCRAQ6ISU1 281 aaPredicted RBP8.07□□□□□ -1.12
MARK3-216ENST00000558953 STYK1Q6J9G0 422 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 TPTE2Q6XPS3 522 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 NBPF5PQ86XG9 351 aaPredicted RBP8.07□□□□□ -1.12
MARK3-216ENST00000558953 GPIHBP1Q8IV16 184 aa8.07□□□□□ -1.12
MARK3-216ENST00000558953 RRAGCQ9HB90 399 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms