RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 SOX18P35713 384 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 TRIP4Q15650 581 aaPredicted RBP5.5□□□□□ -1.53
LRRC28-212ENST00000558911 ETFBKMTQ8IXQ9 262 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 RASSF4Q9H2L5 321 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 CUX2O14529 1486 aa5.5□□□□□ -1.53
LRRC28-212ENST00000558911 PRR19A6NJB7 356 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 A6NJR5 290 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 FSCN2O14926 492 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 HYAL2Q12891 473 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 FKBP5Q13451 457 aaPredicted RBP5.49□□□□□ -1.53
LRRC28-212ENST00000558911 TTC39BQ5VTQ0 682 aaPredicted RBP5.49□□□□□ -1.53
LRRC28-212ENST00000558911 ADAMTSL4Q6UY14 1074 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 KIAA1211Q6ZU35 1233 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 BEND4Q6ZU67 534 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 CACTIN-AS1Q8N1I8 211 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 FAM200AQ8TCP9 573 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 FAM46AQ96IP4 442 aaKnown RBP5.49□□□□□ -1.53
LRRC28-212ENST00000558911 MYRFLQ96LU7 910 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 MFSD14AQ96MC6 490 aa5.49□□□□□ -1.53
LRRC28-212ENST00000558911 PRMT3O60678 531 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 EPHA1P21709 976 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 RFX1P22670 979 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 HOXA10P31260 410 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-212ENST00000558911 UVSSAQ2YD98 709 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 PROSER2Q86WR7 435 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-212ENST00000558911 DTX1Q86Y01 620 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 FAM20CQ8IXL6 584 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 FBXL6Q8N531 539 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 FOXD4L4Q8WXT5 416 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-212ENST00000558911 SLC7A3Q8WY07 619 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 KLHDC7BQ96G42 594 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 MKNK1Q9BUB5 465 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 SAP130Q9H0E3 1048 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 SRCAPQ6ZRS2 3230 aa5.48□□□□□ -1.53
LRRC28-212ENST00000558911 HECW2Q9P2P5 1572 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 ADAM11O75078 769 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 CYP2E1P05181 493 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-212ENST00000558911 BRD2P25440 801 aaKnown RBP5.47□□□□□ -1.53
LRRC28-212ENST00000558911 RXRBP28702 533 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 NLRP12P59046 1061 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 NCAPG2Q86XI2 1143 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 CLEC10AQ8IUN9 316 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 OR13H1Q8NG92 308 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 PIK3R5Q8WYR1 880 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 FAM83CQ9BQN1 747 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 ADGRE2Q9UHX3 823 aa5.47□□□□□ -1.53
LRRC28-212ENST00000558911 GAS2O43903 313 aaKnown RBP5.46□□□□□ -1.54
LRRC28-212ENST00000558911 HOXD8P13378 290 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-212ENST00000558911 PREPP48147 710 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 NAA30Q147X3 362 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-212ENST00000558911 FAM26DQ5JW98 314 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 FDX2Q6P4F2 183 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 ABI1Q8IZP0 508 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 CCDC82Q8N4S0 544 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 KLHL23Q8NBE8 558 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 GPR152Q8TDT2 470 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 COL26A1Q96A83 441 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 SEC31BQ9NQW1 1179 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 ANGEL1Q9UNK9 670 aaKnown RBP5.46□□□□□ -1.54
LRRC28-212ENST00000558911 ABCC9O60706 1549 aa5.46□□□□□ -1.54
LRRC28-212ENST00000558911 PTPRAP18433 802 aa5.45□□□□□ -1.54
LRRC28-212ENST00000558911 RUSC1Q9BVN2 902 aa5.45□□□□□ -1.54
LRRC28-212ENST00000558911 PBX4Q9BYU1 374 aa5.45□□□□□ -1.54
LRRC28-212ENST00000558911 ATG3Q9NT62 314 aa5.45□□□□□ -1.54
LRRC28-212ENST00000558911 KANSL3Q9P2N6 904 aa5.45□□□□□ -1.54
LRRC28-212ENST00000558911 SHROOM4Q9ULL8 1493 aa5.45□□□□□ -1.54
LRRC28-212ENST00000558911 CABP4P57796 275 aa5.44□□□□□ -1.54
LRRC28-212ENST00000558911 SGO2Q562F6 1265 aa5.44□□□□□ -1.54
LRRC28-212ENST00000558911 C16orf46Q6P387 395 aa5.44□□□□□ -1.54
LRRC28-212ENST00000558911 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-212ENST00000558911 POP1Q99575 1024 aaKnown RBP5.44□□□□□ -1.54
LRRC28-212ENST00000558911 PIM2Q9P1W9 311 aa5.44□□□□□ -1.54
LRRC28-212ENST00000558911 NOVA2Q9UNW9 492 aaKnown RBP5.44□□□□□ -1.54
LRRC28-212ENST00000558911 FNDC3AQ9Y2H6 1198 aaKnown RBP5.44□□□□□ -1.54
LRRC28-212ENST00000558911 ARID1BQ8NFD5 2236 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-212ENST00000558911 TM4SF5O14894 197 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 TRPA1O75762 1119 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 MAP4P27816 1152 aaKnown RBP5.43□□□□□ -1.54
LRRC28-212ENST00000558911 ZAP70P43403 619 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 ANKRD34AQ69YU3 496 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 OGFOD2Q6N063 350 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 CAPN12Q6ZSI9 719 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 TP53INP2Q8IXH6 220 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 FNBP4Q8N3X1 1017 aaPredicted RBP5.43□□□□□ -1.54
LRRC28-212ENST00000558911 GIMAP7Q8NHV1 300 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 OSBPL1AQ9BXW6 950 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 RNF208Q9H0X6 261 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 ABI2Q9NYB9 513 aaPredicted RBP5.43□□□□□ -1.54
LRRC28-212ENST00000558911 FAM13BQ9NYF5 915 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 LEMD3Q9Y2U8 911 aa5.43□□□□□ -1.54
LRRC28-212ENST00000558911 ACPPP15309 386 aa5.42□□□□□ -1.54
LRRC28-212ENST00000558911 NFKBIBQ15653 356 aa5.42□□□□□ -1.54
LRRC28-212ENST00000558911 AEBP1Q8IUX7 1158 aa5.42□□□□□ -1.54
LRRC28-212ENST00000558911 C12orf50Q8NA57 414 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-212ENST00000558911 H3BRJ5 948 aa5.41□□□□□ -1.54
LRRC28-212ENST00000558911 IGSF3O75054 1194 aa5.41□□□□□ -1.54
LRRC28-212ENST00000558911 F13BP05160 661 aa5.41□□□□□ -1.54
LRRC28-212ENST00000558911 HGSNATQ68CP4 663 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms