RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 ZBTB48P10074 688 aaPredicted RBP11.48□□□□□ -0.57
RORA-208ENST00000558904 PTPN12Q05209 780 aaKnown RBP11.48□□□□□ -0.57
RORA-208ENST00000558904 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
RORA-208ENST00000558904 TRIM28Q13263 835 aaKnown RBP11.48□□□□□ -0.57
RORA-208ENST00000558904 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 LDLRAD1Q5T700 205 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 ISCA1Q9BUE6 129 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 EFCC1Q9HA90 598 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
RORA-208ENST00000558904 MYO3BQ8WXR4 1341 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 MAPK8IP3Q9UPT6 1336 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 TAF1P21675 1872 aa11.48□□□□□ -0.57
RORA-208ENST00000558904 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 IRS4O14654 1257 aaPredicted RBP11.47□□□□□ -0.57
RORA-208ENST00000558904 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 ATP2B4P23634 1241 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 PRAMEF18Q5VWM3 479 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 APOBEC3FQ8IUX4 373 aaKnown RBP11.47□□□□□ -0.57
RORA-208ENST00000558904 R3HDMLQ9H3Y0 253 aa11.47□□□□□ -0.57
RORA-208ENST00000558904 XDHP47989 1333 aa11.46□□□□□ -0.57
RORA-208ENST00000558904 WNT10BO00744 389 aa11.46□□□□□ -0.57
RORA-208ENST00000558904 ZBTB22O15209 634 aa11.46□□□□□ -0.57
RORA-208ENST00000558904 PPP1R12BO60237 982 aaPredicted RBP11.46□□□□□ -0.57
RORA-208ENST00000558904 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.57
RORA-208ENST00000558904 LMOD3Q0VAK6 560 aa11.46□□□□□ -0.57
RORA-208ENST00000558904 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.57
RORA-208ENST00000558904 PLEKHF1Q96S99 279 aa11.46□□□□□ -0.57
RORA-208ENST00000558904 ANGEL1Q9UNK9 670 aaKnown RBP11.46□□□□□ -0.57
RORA-208ENST00000558904 KIAA0100Q14667 2235 aaKnown RBP11.45□□□□□ -0.58
RORA-208ENST00000558904 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
RORA-208ENST00000558904 DLG5Q8TDM6 1919 aa11.45□□□□□ -0.58
RORA-208ENST00000558904 DLL1O00548 723 aa11.45□□□□□ -0.58
RORA-208ENST00000558904 SP3Q02447 781 aa11.45□□□□□ -0.58
RORA-208ENST00000558904 MAP3K11Q16584 847 aa11.45□□□□□ -0.58
RORA-208ENST00000558904 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
RORA-208ENST00000558904 RBBP6Q7Z6E9 1792 aaKnown RBP11.44□□□□□ -0.58
RORA-208ENST00000558904 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
RORA-208ENST00000558904 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
RORA-208ENST00000558904 SLC17A8Q8NDX2 589 aa11.44□□□□□ -0.58
RORA-208ENST00000558904 ATP5J2-PTCD1G3V325 749 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 HOXB7P09629 217 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 RIPK4P57078 832 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 PRKG1Q13976 671 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 SLC4A8Q2Y0W8 1093 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 SUPT20HL1Q3ZLR7 823 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
RORA-208ENST00000558904 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 CD99L2Q8TCZ2 262 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 HYPKQ9NX55 129 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 SCAF8Q9UPN6 1271 aaKnown RBP11.43□□□□□ -0.58
RORA-208ENST00000558904 PPP2R3BQ9Y5P8 575 aa11.43□□□□□ -0.58
RORA-208ENST00000558904 PDE8AO60658 829 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
RORA-208ENST00000558904 SLC9C1Q4G0N8 1177 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 DACT2Q5SW24 774 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 WNK4Q96J92 1243 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 ZNF333Q96JL9 665 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 CDC5LQ99459 802 aaKnown RBP11.42□□□□□ -0.58
RORA-208ENST00000558904 COA1Q9GZY4 146 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 COL1A1P02452 1464 aaPredicted RBP11.42□□□□□ -0.58
RORA-208ENST00000558904 MKI67P46013 3256 aaKnown RBP11.42□□□□□ -0.58
RORA-208ENST00000558904 PSME4Q14997 1843 aa11.42□□□□□ -0.58
RORA-208ENST00000558904 IREB2P48200 963 aaKnown RBP11.41□□□□□ -0.58
RORA-208ENST00000558904 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
RORA-208ENST00000558904 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
RORA-208ENST00000558904 DEFB129Q9H1M3 183 aa11.41□□□□□ -0.58
RORA-208ENST00000558904 CHPF2Q9P2E5 772 aa11.41□□□□□ -0.58
RORA-208ENST00000558904 MED23Q9ULK4 1368 aa11.41□□□□□ -0.58
RORA-208ENST00000558904 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
RORA-208ENST00000558904 H0YGN5 161 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
RORA-208ENST00000558904 MYO1BO43795 1136 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 CRHR2Q13324 411 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 TTLL5Q6EMB2 1281 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 CCER1Q8TC90 406 aaPredicted RBP11.4□□□□□ -0.58
RORA-208ENST00000558904 FBXW7Q969H0 707 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
RORA-208ENST00000558904 CHL1O00533 1208 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 SASH1O94885 1247 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 GNRH1P01148 92 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
RORA-208ENST00000558904 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
RORA-208ENST00000558904 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 CHMP4AQ9BY43 222 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 ZFYVE28Q9HCC9 887 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 BSDC1Q9NW68 430 aaPredicted RBP11.39□□□□□ -0.59
RORA-208ENST00000558904 LEMD3Q9Y2U8 911 aa11.39□□□□□ -0.59
RORA-208ENST00000558904 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
RORA-208ENST00000558904 PRMT2P55345 433 aa11.38□□□□□ -0.59
RORA-208ENST00000558904 KIF22Q14807 665 aa11.38□□□□□ -0.59
RORA-208ENST00000558904 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
RORA-208ENST00000558904 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms