RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 ADAMTS8Q9UP79 889 aa20.57■□□□□ 0.88
CDC42BPB-203ENST00000558867 HPS5Q9UPZ3 1129 aa20.57■□□□□ 0.88
CDC42BPB-203ENST00000558867 UBE2Q2LH0YL09 131 aa20.56■□□□□ 0.88
CDC42BPB-203ENST00000558867 CCDC30Q5VVM6 783 aa20.56■□□□□ 0.88
CDC42BPB-203ENST00000558867 COL4A1P02462 1669 aa20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 NEXNQ0ZGT2 675 aa20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 NOM1Q5C9Z4 860 aaKnown RBP20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 FBXW7Q969H0 707 aa20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 PSME4Q14997 1843 aa20.55■□□□□ 0.88
CDC42BPB-203ENST00000558867 ELL2O00472 640 aaPredicted RBP20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 TBC1D8O95759 1140 aa20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 ZNF853P0CG23 659 aa20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 TM4SF4P48230 202 aa20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 CTSWP56202 376 aa20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 ARMC9Q7Z3E5 817 aa20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 ZNF296Q8WUU4 475 aaPredicted RBP20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 COA1Q9GZY4 146 aa20.54■□□□□ 0.88
CDC42BPB-203ENST00000558867 NBPF9Q3BBW0 867 aa20.53■□□□□ 0.88
CDC42BPB-203ENST00000558867 STRIP1Q5VSL9 837 aa20.53■□□□□ 0.88
CDC42BPB-203ENST00000558867 GPR25O00155 361 aa20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 MOB2Q70IA6 237 aa20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 APOBEC3FQ8IUX4 373 aaKnown RBP20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 MINPP1Q9UNW1 487 aa20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 LEMD3Q9Y2U8 911 aa20.52■□□□□ 0.88
CDC42BPB-203ENST00000558867 WNT10BO00744 389 aa20.51■□□□□ 0.87
CDC42BPB-203ENST00000558867 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
CDC42BPB-203ENST00000558867 IGHMBP2P38935 993 aaKnown RBP20.51■□□□□ 0.87
CDC42BPB-203ENST00000558867 DACT2Q5SW24 774 aa20.51■□□□□ 0.87
CDC42BPB-203ENST00000558867 FBXO46Q6PJ61 603 aaPredicted RBP20.51■□□□□ 0.87
CDC42BPB-203ENST00000558867 MAP3K2Q9Y2U5 619 aa20.51■□□□□ 0.87
CDC42BPB-203ENST00000558867 FKTNO75072 461 aa20.5■□□□□ 0.87
CDC42BPB-203ENST00000558867 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
CDC42BPB-203ENST00000558867 KSR2Q6VAB6 950 aa20.5■□□□□ 0.87
CDC42BPB-203ENST00000558867 TTLL11Q8NHH1 800 aa20.5■□□□□ 0.87
CDC42BPB-203ENST00000558867 ANKRD2Q9GZV1 360 aa20.5■□□□□ 0.87
CDC42BPB-203ENST00000558867 MRS2Q9HD23 443 aa20.5■□□□□ 0.87
CDC42BPB-203ENST00000558867 INHBEP58166 350 aa20.49■□□□□ 0.87
CDC42BPB-203ENST00000558867 TTLL5Q6EMB2 1281 aa20.49■□□□□ 0.87
CDC42BPB-203ENST00000558867 STK31Q9BXU1 1019 aa20.49■□□□□ 0.87
CDC42BPB-203ENST00000558867 SCAF8Q9UPN6 1271 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-203ENST00000558867 CFHR5Q9BXR6 569 aa20.48■□□□□ 0.87
CDC42BPB-203ENST00000558867 PI4KAP2A4QPH2 592 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 APAF1O14727 1248 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 KCNJ4P48050 445 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 MKRN3Q13064 507 aaKnown RBP20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 CCDC184Q52MB2 194 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 PI4KAP1Q8N8J0 262 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 GREM2Q9H772 168 aa20.47■□□□□ 0.87
CDC42BPB-203ENST00000558867 PTPN12Q05209 780 aaKnown RBP20.46■□□□□ 0.87
CDC42BPB-203ENST00000558867 ZNF804BA4D1E1 1349 aa20.46■□□□□ 0.87
CDC42BPB-203ENST00000558867 MANSC4A6NHS7 340 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 PPP1R12BO60237 982 aaPredicted RBP20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 SASH1O94885 1247 aa20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 PRKG1Q13976 671 aa20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 SLC10A4Q96EP9 437 aa20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 MXD3Q9BW11 206 aa20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 ANGEL1Q9UNK9 670 aaKnown RBP20.45■□□□□ 0.86
CDC42BPB-203ENST00000558867 MYO1BO43795 1136 aa20.44■□□□□ 0.86
CDC42BPB-203ENST00000558867 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
CDC42BPB-203ENST00000558867 SPRYD7Q5W111 196 aa20.44■□□□□ 0.86
CDC42BPB-203ENST00000558867 KIAA0825Q8IV33 1275 aa20.44■□□□□ 0.86
CDC42BPB-203ENST00000558867 MYH3P11055 1940 aa20.44■□□□□ 0.86
CDC42BPB-203ENST00000558867 COL1A1P02452 1464 aaPredicted RBP20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 GTF2IP78347 998 aa20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 LDLRAD1Q5T700 205 aa20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 INTS3Q68E01 1043 aaKnown RBP20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 PPP2R3BQ9Y5P8 575 aa20.43■□□□□ 0.86
CDC42BPB-203ENST00000558867 UNCXA6NJT0 531 aa20.42■□□□□ 0.86
CDC42BPB-203ENST00000558867 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
CDC42BPB-203ENST00000558867 OTUD7BQ6GQQ9 843 aa20.42■□□□□ 0.86
CDC42BPB-203ENST00000558867 MYH16Q9H6N6 1097 aa20.42■□□□□ 0.86
CDC42BPB-203ENST00000558867 WTIPA6NIX2 430 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 H7C1W4 665 aa20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 ZBTB48P10074 688 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 ITGA6P23229 1130 aa20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 CWF19L2Q2TBE0 894 aaKnown RBP20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 SUPT20HL1Q3ZLR7 823 aa20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 DEFB129Q9H1M3 183 aa20.41■□□□□ 0.86
CDC42BPB-203ENST00000558867 TXNRD3Q86VQ6 643 aa20.4■□□□□ 0.86
CDC42BPB-203ENST00000558867 PLA2G12BQ9BX93 195 aa20.4■□□□□ 0.86
CDC42BPB-203ENST00000558867 SPEF2Q9C093 1822 aa20.39■□□□□ 0.86
CDC42BPB-203ENST00000558867 IFNL1Q8IU54 200 aa20.39■□□□□ 0.85
CDC42BPB-203ENST00000558867 CD209Q9NNX6 404 aa20.39■□□□□ 0.85
CDC42BPB-203ENST00000558867 TRIM17Q9Y577 477 aa20.39■□□□□ 0.85
CDC42BPB-203ENST00000558867 ANKRD18BA2A2Z9 1011 aa20.38■□□□□ 0.85
CDC42BPB-203ENST00000558867 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
CDC42BPB-203ENST00000558867 MTMR14Q8NCE2 650 aa20.38■□□□□ 0.85
CDC42BPB-203ENST00000558867 ERO1AQ96HE7 468 aa20.38■□□□□ 0.85
CDC42BPB-203ENST00000558867 ZBED3Q96IU2 234 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-203ENST00000558867 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPB-203ENST00000558867 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms