RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 COL4A1P02462 1669 aa13.62□□□□□ -0.23
CTDSPL2-203ENST00000558791 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
CTDSPL2-203ENST00000558791 ZNF853P0CG23 659 aa13.61□□□□□ -0.23
CTDSPL2-203ENST00000558791 NF2P35240 595 aa13.61□□□□□ -0.23
CTDSPL2-203ENST00000558791 GNAI1P63096 354 aa13.61□□□□□ -0.23
CTDSPL2-203ENST00000558791 OGFOD1Q8N543 542 aa13.61□□□□□ -0.23
CTDSPL2-203ENST00000558791 MBIPQ9NS73 344 aa13.61□□□□□ -0.23
CTDSPL2-203ENST00000558791 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
CTDSPL2-203ENST00000558791 TM4SF4P48230 202 aa13.6□□□□□ -0.23
CTDSPL2-203ENST00000558791 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
CTDSPL2-203ENST00000558791 MYD88Q99836 296 aa13.6□□□□□ -0.23
CTDSPL2-203ENST00000558791 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
CTDSPL2-203ENST00000558791 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 PRPF38BQ5VTL8 546 aaKnown RBP13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 CFHR5Q9BXR6 569 aa13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 BSDC1Q9NW68 430 aaPredicted RBP13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
CTDSPL2-203ENST00000558791 SOX10P56693 466 aa13.58□□□□□ -0.24
CTDSPL2-203ENST00000558791 SREBF2Q12772 1141 aa13.58□□□□□ -0.24
CTDSPL2-203ENST00000558791 STRIP1Q5VSL9 837 aa13.58□□□□□ -0.24
CTDSPL2-203ENST00000558791 CTSWP56202 376 aa13.57□□□□□ -0.24
CTDSPL2-203ENST00000558791 COA1Q9GZY4 146 aa13.57□□□□□ -0.24
CTDSPL2-203ENST00000558791 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
CTDSPL2-203ENST00000558791 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
CTDSPL2-203ENST00000558791 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 ALDH1A1P00352 501 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 CCT4P50991 539 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 FBXO46Q6PJ61 603 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 TTLL11Q8NHH1 800 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 ZNF296Q8WUU4 475 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
CTDSPL2-203ENST00000558791 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 GPR25O00155 361 aa13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 WNT10BO00744 389 aa13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 INHBEP58166 350 aa13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 SPEF2Q9C093 1822 aa13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL2-203ENST00000558791 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
CTDSPL2-203ENST00000558791 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
CTDSPL2-203ENST00000558791 NBPF9Q3BBW0 867 aa13.54□□□□□ -0.24
CTDSPL2-203ENST00000558791 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
CTDSPL2-203ENST00000558791 ANKRD2Q9GZV1 360 aa13.54□□□□□ -0.24
CTDSPL2-203ENST00000558791 MAP3K2Q9Y2U5 619 aa13.54□□□□□ -0.24
CTDSPL2-203ENST00000558791 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 FKTNO75072 461 aa13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 TBC1D8O95759 1140 aa13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 LAMB1P07942 1786 aa13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 ECM29Q5VYK3 1845 aa13.53□□□□□ -0.24
CTDSPL2-203ENST00000558791 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 APAF1O14727 1248 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 LDLRAD1Q5T700 205 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 MOB2Q70IA6 237 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 PI4KAP1Q8N8J0 262 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 C8orf58Q8NAV2 365 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 STK31Q9BXU1 1019 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 PPP2R3BQ9Y5P8 575 aa13.52□□□□□ -0.25
CTDSPL2-203ENST00000558791 ZNF804BA4D1E1 1349 aa13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 MANSC4A6NHS7 340 aaPredicted RBP13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 H7C1W4 665 aa13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 MTMR14Q8NCE2 650 aa13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 GREM2Q9H772 168 aa13.51□□□□□ -0.25
CTDSPL2-203ENST00000558791 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 PPP1R12BO60237 982 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 ZBED3Q96IU2 234 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
CTDSPL2-203ENST00000558791 FKBP1AP62942 108 aaKnown RBP13.49□□□□□ -0.25
CTDSPL2-203ENST00000558791 MYH16Q9H6N6 1097 aa13.49□□□□□ -0.25
CTDSPL2-203ENST00000558791 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
CTDSPL2-203ENST00000558791 MYO1BO43795 1136 aa13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 SASH1O94885 1247 aa13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 CSF1RP07333 972 aa13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 ITGA6P23229 1130 aa13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 DLGAP5Q15398 846 aa13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
CTDSPL2-203ENST00000558791 C15orf52Q6ZUT6 534 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms