RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CCDC57Q2TAC2 916 aa15.08■□□□□ 0
HERC1-202ENST00000558324 IFFO2Q5TF58 517 aa15.08■□□□□ 0
HERC1-202ENST00000558324 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0
HERC1-202ENST00000558324 HELBQ8NG08 1087 aaPredicted RBP15.08■□□□□ 0
HERC1-202ENST00000558324 MXD3Q9BW11 206 aa15.08■□□□□ 0
HERC1-202ENST00000558324 ASTN2O75129 1339 aaPredicted RBP15.08■□□□□ 0
HERC1-202ENST00000558324 SNAP23O00161 211 aa15.07■□□□□ 0
HERC1-202ENST00000558324 TAF5LO75529 589 aa15.07■□□□□ 0
HERC1-202ENST00000558324 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
HERC1-202ENST00000558324 CYP4F22Q6NT55 531 aa15.07■□□□□ 0
HERC1-202ENST00000558324 KRT26Q7Z3Y9 468 aa15.07■□□□□ 0
HERC1-202ENST00000558324 AGBL3Q8NEM8 1001 aa15.07■□□□□ 0
HERC1-202ENST00000558324 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
HERC1-202ENST00000558324 SUCLG2Q96I99 432 aa15.07■□□□□ 0
HERC1-202ENST00000558324 CAPNS2Q96L46 248 aa15.07■□□□□ 0
HERC1-202ENST00000558324 GGA3Q9NZ52 723 aa15.07■□□□□ 0
HERC1-202ENST00000558324 TLL2Q9Y6L7 1015 aa15.07■□□□□ 0
HERC1-202ENST00000558324 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
HERC1-202ENST00000558324 TRPM7Q96QT4 1865 aa15.07■□□□□ 0
HERC1-202ENST00000558324 USP17L8P0C7I0 530 aa15.06■□□□□ 0
HERC1-202ENST00000558324 COA1Q9GZY4 146 aa15.06■□□□□ 0
HERC1-202ENST00000558324 CNNM1Q9NRU3 951 aa15.06■□□□□ 0
HERC1-202ENST00000558324 SMC4Q9NTJ3 1288 aa15.06■□□□□ 0
HERC1-202ENST00000558324 PTPRCP08575 1304 aa15.06■□□□□ 0
HERC1-202ENST00000558324 ZNF609O15014 1411 aa15.06■□□□□ 0
HERC1-202ENST00000558324 PSME4Q14997 1843 aa15.06■□□□□ 0
HERC1-202ENST00000558324 FOXN1O15353 648 aa15.05■□□□□ -0
HERC1-202ENST00000558324 PLIN1O60240 522 aa15.05■□□□□ -0
HERC1-202ENST00000558324 ZNF280AP59817 542 aaPredicted RBP15.05■□□□□ -0
HERC1-202ENST00000558324 DACT2Q5SW24 774 aa15.05■□□□□ -0
HERC1-202ENST00000558324 LDHAL6AQ6ZMR3 332 aa15.05■□□□□ -0
HERC1-202ENST00000558324 SAPCD2Q86UD0 394 aa15.05■□□□□ -0
HERC1-202ENST00000558324 AIDAQ96BJ3 306 aa15.05■□□□□ -0
HERC1-202ENST00000558324 KAZALD1Q96I82 304 aa15.05■□□□□ -0
HERC1-202ENST00000558324 GMLQ99445 158 aa15.05■□□□□ -0
HERC1-202ENST00000558324 MYOZ2Q9NPC6 264 aa15.05■□□□□ -0
HERC1-202ENST00000558324 ECE1P42892 770 aa15.04■□□□□ -0
HERC1-202ENST00000558324 SCARF1Q14162 830 aa15.04■□□□□ -0
HERC1-202ENST00000558324 ANGEL2Q5VTE6 544 aaKnown RBP15.04■□□□□ -0
HERC1-202ENST00000558324 SULF1Q8IWU6 871 aa15.04■□□□□ -0
HERC1-202ENST00000558324 BICC1Q9H694 974 aaKnown RBP15.04■□□□□ -0
HERC1-202ENST00000558324 A0A1B0GUL6 1792 aa15.03■□□□□ -0
HERC1-202ENST00000558324 GTF2IP78347 998 aa15.03■□□□□ -0
HERC1-202ENST00000558324 STRIP1Q5VSL9 837 aa15.03■□□□□ -0
HERC1-202ENST00000558324 SCAF8Q9UPN6 1271 aaKnown RBP15.03■□□□□ -0
HERC1-202ENST00000558324 UTYO14607 1347 aa15.02■□□□□ -0
HERC1-202ENST00000558324 MYO3BQ8WXR4 1341 aa15.02■□□□□ -0
HERC1-202ENST00000558324 ZNF646O15015 1829 aaPredicted RBP15.02■□□□□ -0
HERC1-202ENST00000558324 AOC2O75106 756 aa15.02■□□□□ -0
HERC1-202ENST00000558324 ALDH1L2Q3SY69 923 aa15.02■□□□□ -0
HERC1-202ENST00000558324 TTLL5Q6EMB2 1281 aa15.02■□□□□ -0
HERC1-202ENST00000558324 KIAA0825Q8IV33 1275 aa15.02■□□□□ -0
HERC1-202ENST00000558324 TRMT2AQ8IZ69 625 aaKnown RBP15.02■□□□□ -0
HERC1-202ENST00000558324 TNS4Q8IZW8 715 aa15.02■□□□□ -0
HERC1-202ENST00000558324 OGFOD1Q8N543 542 aa15.02■□□□□ -0
HERC1-202ENST00000558324 PUS3Q9BZE2 481 aaKnown RBP15.02■□□□□ -0
HERC1-202ENST00000558324 CD209Q9NNX6 404 aa15.02■□□□□ -0
HERC1-202ENST00000558324 WBP1LQ9NX94 342 aa15.02■□□□□ -0
HERC1-202ENST00000558324 THSD7BQ9C0I4 1608 aa15.02□□□□□ -0.01
HERC1-202ENST00000558324 IRS2Q9Y4H2 1338 aa15.01□□□□□ -0.01
HERC1-202ENST00000558324 SASH1O94885 1247 aa15.01□□□□□ -0.01
HERC1-202ENST00000558324 HUNKP57058 714 aa15.01□□□□□ -0.01
HERC1-202ENST00000558324 ZNF804AQ7Z570 1209 aa15.01□□□□□ -0.01
HERC1-202ENST00000558324 CDCA5Q96FF9 252 aa15.01□□□□□ -0.01
HERC1-202ENST00000558324 JAG2Q9Y219 1238 aa15.01□□□□□ -0.01
HERC1-202ENST00000558324 CTCFP49711 727 aaPredicted RBP15□□□□□ -0.01
HERC1-202ENST00000558324 MAP2K1Q02750 393 aaPredicted RBP15□□□□□ -0.01
HERC1-202ENST00000558324 NBPF9Q3BBW0 867 aa15□□□□□ -0.01
HERC1-202ENST00000558324 ANKRD44Q8N8A2 993 aa15□□□□□ -0.01
HERC1-202ENST00000558324 GBA2Q9HCG7 927 aaPredicted RBP15□□□□□ -0.01
HERC1-202ENST00000558324 RABL6Q3YEC7 729 aaPredicted RBP14.99□□□□□ -0.01
HERC1-202ENST00000558324 MIER1Q8N108 512 aa14.99□□□□□ -0.01
HERC1-202ENST00000558324 C2orf69Q8N8R5 385 aa14.99□□□□□ -0.01
HERC1-202ENST00000558324 KLHDC4Q8TBB5 520 aa14.99□□□□□ -0.01
HERC1-202ENST00000558324 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
HERC1-202ENST00000558324 NOB1Q9ULX3 412 aaKnown RBP14.99□□□□□ -0.01
HERC1-202ENST00000558324 F8W031 263 aaPredicted RBP14.98□□□□□ -0.01
HERC1-202ENST00000558324 WNT10BO00744 389 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 CAPN15O75808 1086 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
HERC1-202ENST00000558324 LBX1P52954 281 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 LRRC24Q50LG9 513 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
HERC1-202ENST00000558324 CERS5Q8N5B7 392 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 HHIPL1Q96JK4 782 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 BEGAINQ9BUH8 593 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 HDAC9Q9UKV0 1011 aa14.98□□□□□ -0.01
HERC1-202ENST00000558324 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
HERC1-202ENST00000558324 HSPA8P11142 646 aaKnown RBP14.97□□□□□ -0.01
HERC1-202ENST00000558324 IL1R1P14778 569 aa14.97□□□□□ -0.01
HERC1-202ENST00000558324 GYG1P46976 350 aa14.97□□□□□ -0.01
HERC1-202ENST00000558324 METTL24Q5JXM2 366 aa14.97□□□□□ -0.01
HERC1-202ENST00000558324 PRAMEF18Q5VWM3 479 aa14.97□□□□□ -0.01
HERC1-202ENST00000558324 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
HERC1-202ENST00000558324 TSKSQ9UJT2 592 aa14.97□□□□□ -0.01
HERC1-202ENST00000558324 MROH5Q6ZUA9 1318 aa14.96□□□□□ -0.01
HERC1-202ENST00000558324 MAP2K2P36507 400 aa14.96□□□□□ -0.01
HERC1-202ENST00000558324 UBE4AQ14139 1066 aa14.96□□□□□ -0.01
HERC1-202ENST00000558324 RGMBQ6NW40 437 aa14.96□□□□□ -0.01
HERC1-202ENST00000558324 RIPOR2Q9Y4F9 1068 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms