RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DZIP1LQ8IYY4 767 aaKnown RBP9.77□□□□□ -0.85
RTF1-205ENST00000558298 GPC2Q8N158 579 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 MPNDQ8N594 471 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 ANTXR1Q9H6X2 564 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 GRPEL1Q9HAV7 217 aa9.77□□□□□ -0.85
RTF1-205ENST00000558298 MSNP26038 577 aaKnown RBP9.76□□□□□ -0.85
RTF1-205ENST00000558298 SCNN1DP51172 638 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 AOC3Q16853 763 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 CCDC57Q2TAC2 916 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 UTP14CQ5TAP6 766 aaKnown RBP9.76□□□□□ -0.85
RTF1-205ENST00000558298 LMBR1LQ6UX01 489 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 DPP8Q6V1X1 898 aaPredicted RBP9.76□□□□□ -0.85
RTF1-205ENST00000558298 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
RTF1-205ENST00000558298 EYA3Q99504 573 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 ANKRD2Q9GZV1 360 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 CHMP4BQ9H444 224 aaKnown RBP9.76□□□□□ -0.85
RTF1-205ENST00000558298 BICC1Q9H694 974 aaKnown RBP9.76□□□□□ -0.85
RTF1-205ENST00000558298 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 IRS2Q9Y4H2 1338 aa9.76□□□□□ -0.85
RTF1-205ENST00000558298 YDJCA8MPS7 323 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 PPIP5K2O43314 1243 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 OFD1O75665 1012 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 CIAO1O76071 339 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 POTEIP0CG38 1075 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 POTEJP0CG39 1038 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 ATP2B4P23634 1241 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 RFX5P48382 616 aaPredicted RBP9.75□□□□□ -0.85
RTF1-205ENST00000558298 GPSM2P81274 684 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 ZSCAN30Q86W11 494 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
RTF1-205ENST00000558298 LARGE2Q8N3Y3 721 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 TMEM57Q8N5G2 664 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 SMC1BQ8NDV3 1235 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 TBC1D16Q8TBP0 767 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 JDP2Q8WYK2 163 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 TBC1D32Q96NH3 1257 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 MPHOSPH8Q99549 860 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 MEIS3Q99687 375 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 TAF1DQ9H5J8 278 aaPredicted RBP9.75□□□□□ -0.85
RTF1-205ENST00000558298 COPRSQ9NQ92 184 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 POLLQ9UGP5 575 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 MINPP1Q9UNW1 487 aa9.75□□□□□ -0.85
RTF1-205ENST00000558298 IQCA1LA6NCM1 817 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 DYNC1I1O14576 645 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 ZBTB7BO15156 539 aaPredicted RBP9.74□□□□□ -0.85
RTF1-205ENST00000558298 TRAK2O60296 914 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 RLBP1P12271 317 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 GGA1Q9UJY5 639 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 ZNRF3Q9ULT6 936 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 DDX19BQ9UMR2 479 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 RIPOR2Q9Y4F9 1068 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 MROH5Q6ZUA9 1318 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 PASKQ96RG2 1323 aa9.74□□□□□ -0.85
RTF1-205ENST00000558298 GNAI2P04899 355 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 MMP14P50281 582 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 PTPN12Q05209 780 aaKnown RBP9.73□□□□□ -0.85
RTF1-205ENST00000558298 CXCL9Q07325 125 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
RTF1-205ENST00000558298 NIM1KQ8IY84 436 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 VGLL2Q8N8G2 317 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 NSFL1CQ9UNZ2 370 aaKnown RBP9.73□□□□□ -0.85
RTF1-205ENST00000558298 MYH13Q9UKX3 1938 aa9.73□□□□□ -0.85
RTF1-205ENST00000558298 APLP1P51693 650 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
RTF1-205ENST00000558298 CHRNDQ07001 517 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 UBE4AQ14139 1066 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 LDHAL6AQ6ZMR3 332 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 PODNQ7Z5L7 613 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 LDHDQ86WU2 507 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 HSCBQ8IWL3 235 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 CCDC85AQ96PX6 553 aaPredicted RBP9.72□□□□□ -0.85
RTF1-205ENST00000558298 PPP1R9BQ96SB3 815 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
RTF1-205ENST00000558298 LRRFIP2Q9Y608 721 aaKnown RBP9.72□□□□□ -0.85
RTF1-205ENST00000558298 THSD7BQ9C0I4 1608 aa9.71□□□□□ -0.85
RTF1-205ENST00000558298 EYA2O00167 538 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 UFL1O94874 794 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 KIF20AO95235 890 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.86
RTF1-205ENST00000558298 EPHX2P34913 555 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 POLA2Q14181 598 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 CHADLQ6NUI6 762 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.86
RTF1-205ENST00000558298 SSH3Q8TE77 659 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 COA1Q9GZY4 146 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 ZBTB40Q9NUA8 1239 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 GPRC5DQ9NZD1 345 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 ANKIB1Q9P2G1 1089 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 TNNQ9UQP3 1299 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 ZNF804BA4D1E1 1349 aa9.71□□□□□ -0.86
RTF1-205ENST00000558298 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 RPS12P25398 132 aaKnown RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 IL15P40933 162 aaPredicted RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 EPS15P42566 896 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
RTF1-205ENST00000558298 FKBP1AP62942 108 aaKnown RBP9.7□□□□□ -0.86
RTF1-205ENST00000558298 TAF7LQ5H9L4 462 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms