RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 PI4KAP1Q8N8J0 262 aa13.75□□□□□ -0.21
SHF-203ENST00000558294 GREM2Q9H772 168 aa13.75□□□□□ -0.21
SHF-203ENST00000558294 BSDC1Q9NW68 430 aaPredicted RBP13.75□□□□□ -0.21
SHF-203ENST00000558294 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
SHF-203ENST00000558294 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
SHF-203ENST00000558294 DACT2Q5SW24 774 aa13.74□□□□□ -0.21
SHF-203ENST00000558294 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
SHF-203ENST00000558294 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
SHF-203ENST00000558294 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
SHF-203ENST00000558294 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
SHF-203ENST00000558294 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
SHF-203ENST00000558294 SCAF8Q9UPN6 1271 aaKnown RBP13.73□□□□□ -0.21
SHF-203ENST00000558294 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
SHF-203ENST00000558294 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
SHF-203ENST00000558294 MOB2Q70IA6 237 aa13.72□□□□□ -0.21
SHF-203ENST00000558294 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
SHF-203ENST00000558294 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 H7C1W4 665 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 WNT10BO00744 389 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 STRIP1Q5VSL9 837 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 G2E3Q7L622 706 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 UBE3BQ7Z3V4 1068 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 TXNRD3Q86VQ6 643 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 STK31Q9BXU1 1019 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 COA1Q9GZY4 146 aa13.71□□□□□ -0.21
SHF-203ENST00000558294 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
SHF-203ENST00000558294 CTU1Q7Z7A3 348 aaKnown RBP13.7□□□□□ -0.22
SHF-203ENST00000558294 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
SHF-203ENST00000558294 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
SHF-203ENST00000558294 LEMD3Q9Y2U8 911 aa13.7□□□□□ -0.22
SHF-203ENST00000558294 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
SHF-203ENST00000558294 CASP7P55210 303 aa13.69□□□□□ -0.22
SHF-203ENST00000558294 SOX10P56693 466 aa13.69□□□□□ -0.22
SHF-203ENST00000558294 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
SHF-203ENST00000558294 TWISTNBQ3B726 338 aaPredicted RBP13.69□□□□□ -0.22
SHF-203ENST00000558294 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
SHF-203ENST00000558294 ZNF804BA4D1E1 1349 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 SASH1O94885 1247 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 ITGA6P23229 1130 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 KLRK1P26718 216 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 MMP14P50281 582 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 GCKRQ14397 625 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
SHF-203ENST00000558294 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 CSF1RP07333 972 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 NF2P35240 595 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 TM4SF4P48230 202 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 FLIIQ13045 1269 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
SHF-203ENST00000558294 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 TTLL5Q6EMB2 1281 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 ZBED3Q96IU2 234 aaPredicted RBP13.67□□□□□ -0.22
SHF-203ENST00000558294 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
SHF-203ENST00000558294 TBC1D8O95759 1140 aa13.66□□□□□ -0.22
SHF-203ENST00000558294 GTF2IP78347 998 aa13.66□□□□□ -0.22
SHF-203ENST00000558294 APOBEC3FQ8IUX4 373 aaKnown RBP13.66□□□□□ -0.22
SHF-203ENST00000558294 KIAA0825Q8IV33 1275 aa13.66□□□□□ -0.22
SHF-203ENST00000558294 ZNF296Q8WUU4 475 aaPredicted RBP13.66□□□□□ -0.22
SHF-203ENST00000558294 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
SHF-203ENST00000558294 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
SHF-203ENST00000558294 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
SHF-203ENST00000558294 IL16Q14005 1332 aa13.65□□□□□ -0.22
SHF-203ENST00000558294 IRS2Q9Y4H2 1338 aa13.65□□□□□ -0.22
SHF-203ENST00000558294 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
SHF-203ENST00000558294 CHRNDQ07001 517 aa13.65□□□□□ -0.22
SHF-203ENST00000558294 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
SHF-203ENST00000558294 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
SHF-203ENST00000558294 MYH16Q9H6N6 1097 aa13.65□□□□□ -0.22
SHF-203ENST00000558294 HDAC9Q9UKV0 1011 aa13.65□□□□□ -0.22
SHF-203ENST00000558294 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
SHF-203ENST00000558294 KCNJ4P48050 445 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 SREBF2Q12772 1141 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 MKRN3Q13064 507 aaKnown RBP13.64□□□□□ -0.23
SHF-203ENST00000558294 FKBP5Q13451 457 aaPredicted RBP13.64□□□□□ -0.23
SHF-203ENST00000558294 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
SHF-203ENST00000558294 LDLRAD1Q5T700 205 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
SHF-203ENST00000558294 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 GPR25O00155 361 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 SNAP23O00161 211 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 PRKG1Q13976 671 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 C15orf52Q6ZUT6 534 aaKnown RBP13.63□□□□□ -0.23
SHF-203ENST00000558294 CERS5Q8N5B7 392 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 CFHR5Q9BXR6 569 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
SHF-203ENST00000558294 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 TAF5LO75529 589 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 FOXO4P98177 505 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 SPRYD7Q5W111 196 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
SHF-203ENST00000558294 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
SHF-203ENST00000558294 LAMB1P07942 1786 aa13.61□□□□□ -0.23
SHF-203ENST00000558294 VAMP4O75379 141 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms