RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 PODNQ7Z5L7 613 aa17.07■□□□□ 0.32
ALPK3-202ENST00000558077 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
ALPK3-202ENST00000558077 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
ALPK3-202ENST00000558077 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
ALPK3-202ENST00000558077 KLHDC4Q8TBB5 520 aa17.06■□□□□ 0.32
ALPK3-202ENST00000558077 TRPM4Q8TD43 1214 aa17.06■□□□□ 0.32
ALPK3-202ENST00000558077 MEIS3Q99687 375 aa17.06■□□□□ 0.32
ALPK3-202ENST00000558077 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
ALPK3-202ENST00000558077 EGFRP00533 1210 aa17.05■□□□□ 0.32
ALPK3-202ENST00000558077 RPS12P25398 132 aaKnown RBP17.05■□□□□ 0.32
ALPK3-202ENST00000558077 LRRC24Q50LG9 513 aa17.05■□□□□ 0.32
ALPK3-202ENST00000558077 MICALL2Q8IY33 904 aa17.05■□□□□ 0.32
ALPK3-202ENST00000558077 CNTROBQ8N137 903 aa17.05■□□□□ 0.32
ALPK3-202ENST00000558077 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
ALPK3-202ENST00000558077 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
ALPK3-202ENST00000558077 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
ALPK3-202ENST00000558077 TAF7LQ5H9L4 462 aa17.04■□□□□ 0.32
ALPK3-202ENST00000558077 DACT2Q5SW24 774 aa17.04■□□□□ 0.32
ALPK3-202ENST00000558077 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
ALPK3-202ENST00000558077 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
ALPK3-202ENST00000558077 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
ALPK3-202ENST00000558077 CNNM1Q9NRU3 951 aa17.04■□□□□ 0.32
ALPK3-202ENST00000558077 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
ALPK3-202ENST00000558077 USP17L3A6NCW0 530 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 USP17L4A6NCW7 530 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 G3V3G9 751 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
ALPK3-202ENST00000558077 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
ALPK3-202ENST00000558077 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
ALPK3-202ENST00000558077 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 USP17L1Q7RTZ2 530 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 VGLL2Q8N8G2 317 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 PCDH10Q9P2E7 1040 aa17.03■□□□□ 0.32
ALPK3-202ENST00000558077 PLIN1O60240 522 aa17.02■□□□□ 0.32
ALPK3-202ENST00000558077 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.32
ALPK3-202ENST00000558077 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
ALPK3-202ENST00000558077 AGBL3Q8NEM8 1001 aa17.02■□□□□ 0.32
ALPK3-202ENST00000558077 H7C1D1 291 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 RLBP1P12271 317 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 KCNJ4P48050 445 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 UBE4AQ14139 1066 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 ATG9AQ7Z3C6 839 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
ALPK3-202ENST00000558077 MROH5Q6ZUA9 1318 aa17■□□□□ 0.31
ALPK3-202ENST00000558077 IL1R1P14778 569 aa17■□□□□ 0.31
ALPK3-202ENST00000558077 TBC1D10BQ4KMP7 808 aaPredicted RBP17■□□□□ 0.31
ALPK3-202ENST00000558077 ZC3H15Q8WU90 426 aaKnown RBP17■□□□□ 0.31
ALPK3-202ENST00000558077 TRPM7Q96QT4 1865 aa17■□□□□ 0.31
ALPK3-202ENST00000558077 PCNTO95613 3336 aa16.99■□□□□ 0.31
ALPK3-202ENST00000558077 EYA2O00167 538 aa16.99■□□□□ 0.31
ALPK3-202ENST00000558077 TRAF5O00463 557 aa16.99■□□□□ 0.31
ALPK3-202ENST00000558077 FAM84BQ96KN1 310 aaPredicted RBP16.99■□□□□ 0.31
ALPK3-202ENST00000558077 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
ALPK3-202ENST00000558077 PDE8BO95263 885 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 GNAI3P08754 354 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 FGFR2P21802 821 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 GTF2IP78347 998 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 MTX1Q13505 466 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
ALPK3-202ENST00000558077 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 TDRD7Q8NHU6 1098 aaKnown RBP16.98■□□□□ 0.31
ALPK3-202ENST00000558077 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
ALPK3-202ENST00000558077 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
ALPK3-202ENST00000558077 USP17L8P0C7I0 530 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 GYG1P46976 350 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 METTL24Q5JXM2 366 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 CST9Q5W186 159 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 FBXO33Q7Z6M2 555 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
ALPK3-202ENST00000558077 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
ALPK3-202ENST00000558077 KIF4BQ2VIQ3 1234 aa16.96■□□□□ 0.31
ALPK3-202ENST00000558077 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
ALPK3-202ENST00000558077 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
ALPK3-202ENST00000558077 TMEM88BA6NKF7 163 aa16.95■□□□□ 0.3
ALPK3-202ENST00000558077 CIAO1O76071 339 aa16.95■□□□□ 0.3
ALPK3-202ENST00000558077 HIBADHP31937 336 aaKnown RBP16.95■□□□□ 0.3
ALPK3-202ENST00000558077 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
ALPK3-202ENST00000558077 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
ALPK3-202ENST00000558077 ZBED3Q96IU2 234 aaPredicted RBP16.95■□□□□ 0.3
ALPK3-202ENST00000558077 FAM205AQ6ZU69 1335 aa16.95■□□□□ 0.3
ALPK3-202ENST00000558077 MYO3BQ8WXR4 1341 aa16.95■□□□□ 0.3
ALPK3-202ENST00000558077 ZBTB7BO15156 539 aaPredicted RBP16.94■□□□□ 0.3
ALPK3-202ENST00000558077 SASH1O94885 1247 aa16.94■□□□□ 0.3
ALPK3-202ENST00000558077 SIL1Q9H173 461 aa16.94■□□□□ 0.3
ALPK3-202ENST00000558077 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
ALPK3-202ENST00000558077 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 GNAI2P04899 355 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
ALPK3-202ENST00000558077 SCARF1Q14162 830 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
ALPK3-202ENST00000558077 JAG2Q9Y219 1238 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms