RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FGFR2P21802 821 aa26.22■■□□□ 1.79
CASC4-204ENST00000557945 DCAF8Q5TAQ9 597 aa26.22■■□□□ 1.79
CASC4-204ENST00000557945 RNF181Q9P0P0 153 aa26.22■■□□□ 1.79
CASC4-204ENST00000557945 TIMM10P62072 90 aa26.21■■□□□ 1.79
CASC4-204ENST00000557945 C9orf131Q5VYM1 1079 aa26.21■■□□□ 1.79
CASC4-204ENST00000557945 TXNRD3Q86VQ6 643 aa26.21■■□□□ 1.79
CASC4-204ENST00000557945 NEUROD6Q96NK8 337 aa26.21■■□□□ 1.79
CASC4-204ENST00000557945 IL1RAPL2Q9NP60 686 aa26.21■■□□□ 1.79
CASC4-204ENST00000557945 UTRNP46939 3433 aa26.21■■□□□ 1.79
CASC4-204ENST00000557945 A0A1B0GUL7 405 aa26.2■■□□□ 1.79
CASC4-204ENST00000557945 DOK7Q18PE1 504 aa26.2■■□□□ 1.79
CASC4-204ENST00000557945 GCC1Q96CN9 775 aa26.2■■□□□ 1.79
CASC4-204ENST00000557945 LRRCC1Q9C099 1032 aa26.2■■□□□ 1.79
CASC4-204ENST00000557945 TNNI3KQ59H18 835 aa26.2■■□□□ 1.78
CASC4-204ENST00000557945 NIM1KQ8IY84 436 aa26.2■■□□□ 1.78
CASC4-204ENST00000557945 JDP2Q8WYK2 163 aa26.2■■□□□ 1.78
CASC4-204ENST00000557945 GPR108Q9NPR9 543 aa26.2■■□□□ 1.78
CASC4-204ENST00000557945 FPGT-TNNI3KV9GXZ4 949 aa26.2■■□□□ 1.78
CASC4-204ENST00000557945 C15orf52Q6ZUT6 534 aaKnown RBP26.19■■□□□ 1.78
CASC4-204ENST00000557945 CLASRPQ8N2M8 674 aaKnown RBP26.19■■□□□ 1.78
CASC4-204ENST00000557945 SMARCA5O60264 1052 aaPredicted RBP26.18■■□□□ 1.78
CASC4-204ENST00000557945 GYG1P46976 350 aa26.18■■□□□ 1.78
CASC4-204ENST00000557945 CAVIN4Q5BKX8 364 aa26.18■■□□□ 1.78
CASC4-204ENST00000557945 ERICH6BQ5W0A0 696 aa26.18■■□□□ 1.78
CASC4-204ENST00000557945 DBNDD1Q9H9R9 158 aa26.18■■□□□ 1.78
CASC4-204ENST00000557945 ZBTB47Q9UFB7 747 aaPredicted RBP26.18■■□□□ 1.78
CASC4-204ENST00000557945 ZNF609O15014 1411 aa26.18■■□□□ 1.78
CASC4-204ENST00000557945 IRS2Q9Y4H2 1338 aa26.17■■□□□ 1.78
CASC4-204ENST00000557945 ADORA1P30542 326 aa26.17■■□□□ 1.78
CASC4-204ENST00000557945 ZNF804AQ7Z570 1209 aa26.17■■□□□ 1.78
CASC4-204ENST00000557945 AACSQ86V21 672 aa26.17■■□□□ 1.78
CASC4-204ENST00000557945 VPS37DQ86XT2 251 aa26.17■■□□□ 1.78
CASC4-204ENST00000557945 SBF1O95248 1867 aa26.16■■□□□ 1.78
CASC4-204ENST00000557945 CCDC88AQ3V6T2 1871 aa26.16■■□□□ 1.78
CASC4-204ENST00000557945 GORABQ5T7V8 394 aa26.16■■□□□ 1.78
CASC4-204ENST00000557945 ANKRD45Q5TZF3 282 aa26.16■■□□□ 1.78
CASC4-204ENST00000557945 EAF2Q96CJ1 260 aaPredicted RBP26.16■■□□□ 1.78
CASC4-204ENST00000557945 XAGE2Q96GT9 111 aa26.16■■□□□ 1.78
CASC4-204ENST00000557945 FAM84BQ96KN1 310 aaPredicted RBP26.16■■□□□ 1.78
CASC4-204ENST00000557945 COA1Q9GZY4 146 aa26.16■■□□□ 1.78
CASC4-204ENST00000557945 ECE2O60344 883 aa26.15■■□□□ 1.78
CASC4-204ENST00000557945 HIBADHP31937 336 aaKnown RBP26.15■■□□□ 1.78
CASC4-204ENST00000557945 B4GALNT3Q6L9W6 998 aa26.15■■□□□ 1.78
CASC4-204ENST00000557945 SMC5Q8IY18 1101 aa26.15■■□□□ 1.78
CASC4-204ENST00000557945 CCDC136Q96JN2 1154 aa26.15■■□□□ 1.78
CASC4-204ENST00000557945 CCDC8Q9H0W5 538 aaPredicted RBP26.15■■□□□ 1.78
CASC4-204ENST00000557945 BCAMP50895 628 aa26.14■■□□□ 1.78
CASC4-204ENST00000557945 ZNRF3Q9ULT6 936 aa26.14■■□□□ 1.78
CASC4-204ENST00000557945 COL4A5P29400 1685 aa26.14■■□□□ 1.77
CASC4-204ENST00000557945 IFIT2P09913 472 aaKnown RBP26.13■■□□□ 1.77
CASC4-204ENST00000557945 FBXO33Q7Z6M2 555 aa26.13■■□□□ 1.77
CASC4-204ENST00000557945 DBNDD2Q9BQY9 259 aa26.13■■□□□ 1.77
CASC4-204ENST00000557945 CD209Q9NNX6 404 aa26.13■■□□□ 1.77
CASC4-204ENST00000557945 PPP4R2Q9NY27 417 aa26.11■■□□□ 1.77
CASC4-204ENST00000557945 TLR7Q9NYK1 1049 aaKnown RBP26.11■■□□□ 1.77
CASC4-204ENST00000557945 DBNLQ9UJU6 430 aaKnown RBP26.11■■□□□ 1.77
CASC4-204ENST00000557945 FRAT2O75474 233 aaPredicted RBP26.1■■□□□ 1.77
CASC4-204ENST00000557945 PHKA1P46020 1223 aa26.1■■□□□ 1.77
CASC4-204ENST00000557945 EIF6P56537 245 aaKnown RBP26.1■■□□□ 1.77
CASC4-204ENST00000557945 CCDC102BQ68D86 513 aa26.1■■□□□ 1.77
CASC4-204ENST00000557945 PODNQ7Z5L7 613 aa26.1■■□□□ 1.77
CASC4-204ENST00000557945 IQSEC3Q9UPP2 1182 aaPredicted RBP26.1■■□□□ 1.77
CASC4-204ENST00000557945 YDJCA8MPS7 323 aa26.09■■□□□ 1.77
CASC4-204ENST00000557945 FZD9O00144 591 aa26.09■■□□□ 1.77
CASC4-204ENST00000557945 FBXW7Q969H0 707 aa26.09■■□□□ 1.77
CASC4-204ENST00000557945 GNL3LQ9NVN8 582 aaKnown RBP26.09■■□□□ 1.77
CASC4-204ENST00000557945 DICER1Q9UPY3 1922 aaKnown RBP26.09■■□□□ 1.77
CASC4-204ENST00000557945 KCNQ5Q9NR82 932 aa26.08■■□□□ 1.77
CASC4-204ENST00000557945 RAD17O75943 681 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 IL1R1P14778 569 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 CCDC158Q5M9N0 1113 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 TDRD7Q8NHU6 1098 aaKnown RBP26.07■■□□□ 1.76
CASC4-204ENST00000557945 LNPKQ9C0E8 428 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 ARAP2Q8WZ64 1704 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 NUCB1Q02818 461 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 TTC39AQ5SRH9 613 aa26.07■■□□□ 1.76
CASC4-204ENST00000557945 CENPQQ7L2Z9 268 aaPredicted RBP26.07■■□□□ 1.76
CASC4-204ENST00000557945 ZNF541Q9H0D2 1346 aa26.06■■□□□ 1.76
CASC4-204ENST00000557945 ZC3H4Q9UPT8 1303 aaKnown RBP26.06■■□□□ 1.76
CASC4-204ENST00000557945 TIAM2Q8IVF5 1701 aa26.06■■□□□ 1.76
CASC4-204ENST00000557945 CXCL9Q07325 125 aa26.06■■□□□ 1.76
CASC4-204ENST00000557945 CHD1LQ86WJ1 897 aa26.06■■□□□ 1.76
CASC4-204ENST00000557945 C16orf71Q8IYS4 520 aaPredicted RBP26.06■■□□□ 1.76
CASC4-204ENST00000557945 UQCRFS1P1P0C7P4 283 aa26.05■■□□□ 1.76
CASC4-204ENST00000557945 GTF2IP78347 998 aa26.05■■□□□ 1.76
CASC4-204ENST00000557945 CHAF1AQ13111 956 aaPredicted RBP26.05■■□□□ 1.76
CASC4-204ENST00000557945 CIAPIN1Q6FI81 312 aa26.05■■□□□ 1.76
CASC4-204ENST00000557945 JAG2Q9Y219 1238 aa26.05■■□□□ 1.76
CASC4-204ENST00000557945 GJA3Q9Y6H8 435 aa26.05■■□□□ 1.76
CASC4-204ENST00000557945 CHD4Q14839 1912 aa26.05■■□□□ 1.76
CASC4-204ENST00000557945 USP17L3A6NCW0 530 aa26.04■■□□□ 1.76
CASC4-204ENST00000557945 USP17L4A6NCW7 530 aa26.04■■□□□ 1.76
CASC4-204ENST00000557945 TNIP1Q15025 636 aa26.04■■□□□ 1.76
CASC4-204ENST00000557945 USP17L1Q7RTZ2 530 aa26.04■■□□□ 1.76
CASC4-204ENST00000557945 KDM2BQ8NHM5 1336 aa26.04■■□□□ 1.76
CASC4-204ENST00000557945 TTLL5Q6EMB2 1281 aa26.03■■□□□ 1.76
CASC4-204ENST00000557945 DPY19L2Q6NUT2 758 aa26.03■■□□□ 1.76
CASC4-204ENST00000557945 PSMD14O00487 310 aa26.02■■□□□ 1.76
CASC4-204ENST00000557945 GPATCH3Q96I76 525 aa26.02■■□□□ 1.76
CASC4-204ENST00000557945 DENND2AQ9ULE3 1009 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms