RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 OS9Q13438 667 aaPredicted RBP31.65■■■□□ 2.66
SMAD6-202ENST00000557916 ZNF526Q8TF50 670 aaPredicted RBP31.65■■■□□ 2.66
SMAD6-202ENST00000557916 FGFR2P21802 821 aa31.63■■■□□ 2.65
SMAD6-202ENST00000557916 TFCP2Q12800 502 aa31.63■■■□□ 2.65
SMAD6-202ENST00000557916 COA1Q9GZY4 146 aa31.63■■■□□ 2.65
SMAD6-202ENST00000557916 KDM2BQ8NHM5 1336 aa31.62■■■□□ 2.65
SMAD6-202ENST00000557916 RAD17O75943 681 aa31.62■■■□□ 2.65
SMAD6-202ENST00000557916 DDNO94850 711 aaPredicted RBP31.62■■■□□ 2.65
SMAD6-202ENST00000557916 CXCL9Q07325 125 aa31.62■■■□□ 2.65
SMAD6-202ENST00000557916 PODNQ7Z5L7 613 aa31.62■■■□□ 2.65
SMAD6-202ENST00000557916 ZNF784Q8NCA9 323 aaPredicted RBP31.62■■■□□ 2.65
SMAD6-202ENST00000557916 EXOC6Q8TAG9 804 aa31.62■■■□□ 2.65
SMAD6-202ENST00000557916 IFIT1P09914 478 aaKnown RBP31.61■■■□□ 2.65
SMAD6-202ENST00000557916 ZNF804AQ7Z570 1209 aa31.61■■■□□ 2.65
SMAD6-202ENST00000557916 LPIN2Q92539 896 aa31.61■■■□□ 2.65
SMAD6-202ENST00000557916 SASH1O94885 1247 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 SLC5A1P13866 664 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 IRX6P78412 446 aaPredicted RBP31.6■■■□□ 2.65
SMAD6-202ENST00000557916 ATP2B3Q16720 1220 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 CIAPIN1Q6FI81 312 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 KCNQ5Q9NR82 932 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 PCDHB15Q9Y5E8 787 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 GJA3Q9Y6H8 435 aa31.6■■■□□ 2.65
SMAD6-202ENST00000557916 AAMPQ13685 434 aa31.59■■■□□ 2.65
SMAD6-202ENST00000557916 GPC2Q8N158 579 aa31.59■■■□□ 2.65
SMAD6-202ENST00000557916 EXOC6BQ9Y2D4 811 aa31.59■■■□□ 2.65
SMAD6-202ENST00000557916 GYG1P46976 350 aa31.58■■■□□ 2.65
SMAD6-202ENST00000557916 TNIP1Q15025 636 aa31.58■■■□□ 2.65
SMAD6-202ENST00000557916 FAM84BQ96KN1 310 aaPredicted RBP31.58■■■□□ 2.65
SMAD6-202ENST00000557916 GPBP1L1Q9HC44 474 aaPredicted RBP31.58■■■□□ 2.65
SMAD6-202ENST00000557916 CD209Q9NNX6 404 aa31.58■■■□□ 2.65
SMAD6-202ENST00000557916 AKAP2Q9Y2D5 859 aa31.58■■■□□ 2.65
SMAD6-202ENST00000557916 CENPBP07199 599 aaPredicted RBP31.58■■■□□ 2.65
SMAD6-202ENST00000557916 HSP90AB4PQ58FF6 505 aa31.58■■■□□ 2.65
SMAD6-202ENST00000557916 HIBADHP31937 336 aaKnown RBP31.57■■■□□ 2.64
SMAD6-202ENST00000557916 CAVIN4Q5BKX8 364 aa31.57■■■□□ 2.64
SMAD6-202ENST00000557916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.57■■■□□ 2.64
SMAD6-202ENST00000557916 PSMD14O00487 310 aa31.55■■■□□ 2.64
SMAD6-202ENST00000557916 FBXO33Q7Z6M2 555 aa31.55■■■□□ 2.64
SMAD6-202ENST00000557916 VPS37DQ86XT2 251 aa31.55■■■□□ 2.64
SMAD6-202ENST00000557916 ERC1Q8IUD2 1116 aa31.55■■■□□ 2.64
SMAD6-202ENST00000557916 IL1R1P14778 569 aa31.54■■■□□ 2.64
SMAD6-202ENST00000557916 TIMM10P62072 90 aa31.54■■■□□ 2.64
SMAD6-202ENST00000557916 A0A1B0GUL7 405 aa31.53■■■□□ 2.64
SMAD6-202ENST00000557916 BCAMP50895 628 aa31.53■■■□□ 2.64
SMAD6-202ENST00000557916 USP17L3A6NCW0 530 aa31.52■■■□□ 2.64
SMAD6-202ENST00000557916 USP17L4A6NCW7 530 aa31.52■■■□□ 2.64
SMAD6-202ENST00000557916 USP17L1Q7RTZ2 530 aa31.52■■■□□ 2.64
SMAD6-202ENST00000557916 L3MBTL3Q96JM7 780 aaPredicted RBP31.52■■■□□ 2.64
SMAD6-202ENST00000557916 NEUROD6Q96NK8 337 aa31.52■■■□□ 2.64
SMAD6-202ENST00000557916 RRAGCQ9HB90 399 aa31.52■■■□□ 2.64
SMAD6-202ENST00000557916 NMRK2Q9NPI5 230 aa31.52■■■□□ 2.64
SMAD6-202ENST00000557916 SCN9AQ15858 1988 aa31.51■■■□□ 2.64
SMAD6-202ENST00000557916 FBXW7Q969H0 707 aa31.51■■■□□ 2.64
SMAD6-202ENST00000557916 GPR108Q9NPR9 543 aa31.51■■■□□ 2.64
SMAD6-202ENST00000557916 VIL1P09327 827 aaKnown RBP31.5■■■□□ 2.63
SMAD6-202ENST00000557916 ADORA1P30542 326 aa31.5■■■□□ 2.63
SMAD6-202ENST00000557916 TDRD7Q8NHU6 1098 aaKnown RBP31.5■■■□□ 2.63
SMAD6-202ENST00000557916 APBB1O00213 710 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 RAB11FIP3O75154 756 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 TNNI3KQ59H18 835 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 TTLL5Q6EMB2 1281 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 RHPN1Q8TCX5 695 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 FPGT-TNNI3KV9GXZ4 949 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 POTECB2RU33 542 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 ZNF609O15014 1411 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 GMPSP49915 693 aaPredicted RBP31.49■■■□□ 2.63
SMAD6-202ENST00000557916 GTF2IP78347 998 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 STRIP1Q5VSL9 837 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 XAGE2Q96GT9 111 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 WDR90Q96KV7 1748 aa31.49■■■□□ 2.63
SMAD6-202ENST00000557916 ZBTB12Q9Y330 459 aaPredicted RBP31.49■■■□□ 2.63
SMAD6-202ENST00000557916 VEGFAP15692 232 aaPredicted RBP31.48■■■□□ 2.63
SMAD6-202ENST00000557916 KIF1BPQ96EK5 621 aa31.48■■■□□ 2.63
SMAD6-202ENST00000557916 DCTPP1Q9H773 170 aa31.48■■■□□ 2.63
SMAD6-202ENST00000557916 IQSEC3Q9UPP2 1182 aaPredicted RBP31.48■■■□□ 2.63
SMAD6-202ENST00000557916 RSBN1LQ6PCB5 846 aaPredicted RBP31.47■■■□□ 2.63
SMAD6-202ENST00000557916 IQCA1LA6NCM1 817 aa31.46■■■□□ 2.63
SMAD6-202ENST00000557916 FRAT2O75474 233 aaPredicted RBP31.46■■■□□ 2.63
SMAD6-202ENST00000557916 RPS12P25398 132 aaKnown RBP31.46■■■□□ 2.63
SMAD6-202ENST00000557916 SCNN1DP51172 638 aa31.46■■■□□ 2.63
SMAD6-202ENST00000557916 DACT2Q5SW24 774 aa31.46■■■□□ 2.63
SMAD6-202ENST00000557916 LMOD1P29536 600 aaPredicted RBP31.45■■■□□ 2.63
SMAD6-202ENST00000557916 GORABQ5T7V8 394 aa31.45■■■□□ 2.63
SMAD6-202ENST00000557916 IL1RAPL2Q9NP60 686 aa31.45■■■□□ 2.63
SMAD6-202ENST00000557916 GNL3LQ9NVN8 582 aaKnown RBP31.45■■■□□ 2.63
SMAD6-202ENST00000557916 HACL1Q9UJ83 578 aa31.45■■■□□ 2.63
SMAD6-202ENST00000557916 PHKA1P46020 1223 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 CCDC102BQ68D86 513 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 AGBL3Q8NEM8 1001 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 DPF2Q92785 391 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 MXD3Q9BW11 206 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 GPRC5DQ9NZD1 345 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 JAG2Q9Y219 1238 aa31.44■■■□□ 2.62
SMAD6-202ENST00000557916 ARAP2Q8WZ64 1704 aa31.43■■■□□ 2.62
SMAD6-202ENST00000557916 EAF2Q96CJ1 260 aaPredicted RBP31.43■■■□□ 2.62
SMAD6-202ENST00000557916 PSME4Q14997 1843 aa31.43■■■□□ 2.62
SMAD6-202ENST00000557916 FAM205AQ6ZU69 1335 aa31.43■■■□□ 2.62
SMAD6-202ENST00000557916 HDAC1Q13547 482 aaPredicted RBP31.42■■■□□ 2.62
SMAD6-202ENST00000557916 EPS15P42566 896 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms