RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 BRPF1P55201 1214 aaPredicted RBP21.06■□□□□ 0.96
NEDD4-212ENST00000557845 CST9Q5W186 159 aa21.06■□□□□ 0.96
NEDD4-212ENST00000557845 CDC37L1Q7L3B6 337 aa21.06■□□□□ 0.96
NEDD4-212ENST00000557845 GMLQ99445 158 aa21.06■□□□□ 0.96
NEDD4-212ENST00000557845 GLIS2Q9BZE0 524 aaPredicted RBP21.06■□□□□ 0.96
NEDD4-212ENST00000557845 USP44Q9H0E7 712 aa21.06■□□□□ 0.96
NEDD4-212ENST00000557845 NOB1Q9ULX3 412 aaKnown RBP21.06■□□□□ 0.96
NEDD4-212ENST00000557845 POLR2AP24928 1970 aaKnown RBP21.06■□□□□ 0.96
NEDD4-212ENST00000557845 ZNF609O15014 1411 aa21.05■□□□□ 0.96
NEDD4-212ENST00000557845 SNAP23O00161 211 aa21.05■□□□□ 0.96
NEDD4-212ENST00000557845 DEFB115Q30KQ5 88 aa21.05■□□□□ 0.96
NEDD4-212ENST00000557845 BICC1Q9H694 974 aaKnown RBP21.05■□□□□ 0.96
NEDD4-212ENST00000557845 CNNM1Q9NRU3 951 aa21.05■□□□□ 0.96
NEDD4-212ENST00000557845 A0A1B0GUL6 1792 aa21.05■□□□□ 0.96
NEDD4-212ENST00000557845 ZNF280AP59817 542 aaPredicted RBP21.04■□□□□ 0.96
NEDD4-212ENST00000557845 KIF4BQ2VIQ3 1234 aa21.04■□□□□ 0.96
NEDD4-212ENST00000557845 RABL6Q3YEC7 729 aaPredicted RBP21.04■□□□□ 0.96
NEDD4-212ENST00000557845 ABT1Q9ULW3 272 aaKnown RBP21.04■□□□□ 0.96
NEDD4-212ENST00000557845 RASSF10A6NK89 507 aa21.03■□□□□ 0.96
NEDD4-212ENST00000557845 PLIN1O60240 522 aa21.03■□□□□ 0.96
NEDD4-212ENST00000557845 USP17L8P0C7I0 530 aa21.03■□□□□ 0.96
NEDD4-212ENST00000557845 RARSP54136 660 aaKnown RBP21.03■□□□□ 0.96
NEDD4-212ENST00000557845 DACT2Q5SW24 774 aa21.03■□□□□ 0.96
NEDD4-212ENST00000557845 STRIP1Q5VSL9 837 aa21.03■□□□□ 0.96
NEDD4-212ENST00000557845 C15orf52Q6ZUT6 534 aaKnown RBP21.03■□□□□ 0.96
NEDD4-212ENST00000557845 IRS2Q9Y4H2 1338 aa21.03■□□□□ 0.96
NEDD4-212ENST00000557845 VEGFBP49765 207 aa21.02■□□□□ 0.96
NEDD4-212ENST00000557845 TTLL5Q6EMB2 1281 aa21.02■□□□□ 0.96
NEDD4-212ENST00000557845 USP48Q86UV5 1035 aa21.02■□□□□ 0.96
NEDD4-212ENST00000557845 ANKRD44Q8N8A2 993 aa21.02■□□□□ 0.96
NEDD4-212ENST00000557845 FBXW7Q969H0 707 aa21.02■□□□□ 0.96
NEDD4-212ENST00000557845 CD209Q9NNX6 404 aa21.02■□□□□ 0.96
NEDD4-212ENST00000557845 ZNF646O15015 1829 aaPredicted RBP21.01■□□□□ 0.95
NEDD4-212ENST00000557845 CELF2O95319 508 aaKnown RBP21.01■□□□□ 0.95
NEDD4-212ENST00000557845 DCPSQ96C86 337 aaKnown RBP21.01■□□□□ 0.95
NEDD4-212ENST00000557845 MXD3Q9BW11 206 aa21.01■□□□□ 0.95
NEDD4-212ENST00000557845 PUS3Q9BZE2 481 aaKnown RBP21.01■□□□□ 0.95
NEDD4-212ENST00000557845 API5Q9BZZ5 524 aaKnown RBP21.01■□□□□ 0.95
NEDD4-212ENST00000557845 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
NEDD4-212ENST00000557845 MYOZ2Q9NPC6 264 aa21■□□□□ 0.95
NEDD4-212ENST00000557845 RIPOR2Q9Y4F9 1068 aa21■□□□□ 0.95
NEDD4-212ENST00000557845 MYO3BQ8WXR4 1341 aa21■□□□□ 0.95
NEDD4-212ENST00000557845 PCNTO95613 3336 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 HSPA1AP0DMV8 641 aaKnown RBP20.99■□□□□ 0.95
NEDD4-212ENST00000557845 HSPA1BP0DMV9 641 aaKnown RBP20.99■□□□□ 0.95
NEDD4-212ENST00000557845 GTF2IP78347 998 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 SCARF1Q14162 830 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 DLK2Q6UY11 383 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 KRT26Q7Z3Y9 468 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 ZNF408Q9H9D4 720 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 TLL2Q9Y6L7 1015 aa20.99■□□□□ 0.95
NEDD4-212ENST00000557845 UBE4AQ14139 1066 aa20.98■□□□□ 0.95
NEDD4-212ENST00000557845 ZNF804AQ7Z570 1209 aa20.98■□□□□ 0.95
NEDD4-212ENST00000557845 OGFOD1Q8N543 542 aa20.98■□□□□ 0.95
NEDD4-212ENST00000557845 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
NEDD4-212ENST00000557845 ASTN2O75129 1339 aaPredicted RBP20.98■□□□□ 0.95
NEDD4-212ENST00000557845 IL1R1P14778 569 aa20.97■□□□□ 0.95
NEDD4-212ENST00000557845 GGA3Q9NZ52 723 aa20.97■□□□□ 0.95
NEDD4-212ENST00000557845 MROH5Q6ZUA9 1318 aa20.97■□□□□ 0.95
NEDD4-212ENST00000557845 WDR33Q9C0J8 1336 aaKnown RBP20.97■□□□□ 0.95
NEDD4-212ENST00000557845 MMP14P50281 582 aa20.96■□□□□ 0.95
NEDD4-212ENST00000557845 LRRC24Q50LG9 513 aa20.96■□□□□ 0.95
NEDD4-212ENST00000557845 SAPCD2Q86UD0 394 aa20.96■□□□□ 0.95
NEDD4-212ENST00000557845 ADM5C9JUS6 153 aa20.95■□□□□ 0.94
NEDD4-212ENST00000557845 ANGEL2Q5VTE6 544 aaKnown RBP20.95■□□□□ 0.94
NEDD4-212ENST00000557845 SULF1Q8IWU6 871 aa20.95■□□□□ 0.94
NEDD4-212ENST00000557845 KLHDC4Q8TBB5 520 aa20.95■□□□□ 0.94
NEDD4-212ENST00000557845 KIF16BQ96L93 1317 aa20.95■□□□□ 0.94
NEDD4-212ENST00000557845 UBTFL1P0CB47 393 aaPredicted RBP20.94■□□□□ 0.94
NEDD4-212ENST00000557845 ECE1P42892 770 aa20.94■□□□□ 0.94
NEDD4-212ENST00000557845 CYP4F22Q6NT55 531 aa20.94■□□□□ 0.94
NEDD4-212ENST00000557845 PAXIP1Q6ZW49 1069 aaPredicted RBP20.94■□□□□ 0.94
NEDD4-212ENST00000557845 KIAA0825Q8IV33 1275 aa20.94■□□□□ 0.94
NEDD4-212ENST00000557845 CAPNS2Q96L46 248 aa20.94■□□□□ 0.94
NEDD4-212ENST00000557845 HDAC9Q9UKV0 1011 aa20.94■□□□□ 0.94
NEDD4-212ENST00000557845 IPO8O15397 1037 aaKnown RBP20.93■□□□□ 0.94
NEDD4-212ENST00000557845 BCAR3O75815 825 aa20.93■□□□□ 0.94
NEDD4-212ENST00000557845 NBPF9Q3BBW0 867 aa20.93■□□□□ 0.94
NEDD4-212ENST00000557845 METTL24Q5JXM2 366 aa20.93■□□□□ 0.94
NEDD4-212ENST00000557845 INTS3Q68E01 1043 aaKnown RBP20.93■□□□□ 0.94
NEDD4-212ENST00000557845 HHIPL1Q96JK4 782 aa20.93■□□□□ 0.94
NEDD4-212ENST00000557845 FAM84BQ96KN1 310 aaPredicted RBP20.93■□□□□ 0.94
NEDD4-212ENST00000557845 HDAC5Q9UQL6 1122 aa20.93■□□□□ 0.94
NEDD4-212ENST00000557845 WNT10BO00744 389 aa20.92■□□□□ 0.94
NEDD4-212ENST00000557845 SASH1O94885 1247 aa20.92■□□□□ 0.94
NEDD4-212ENST00000557845 PDE8BO95263 885 aa20.92■□□□□ 0.94
NEDD4-212ENST00000557845 HIBADHP31937 336 aaKnown RBP20.92■□□□□ 0.94
NEDD4-212ENST00000557845 GYG1P46976 350 aa20.92■□□□□ 0.94
NEDD4-212ENST00000557845 RFX5P48382 616 aaPredicted RBP20.92■□□□□ 0.94
NEDD4-212ENST00000557845 CERS5Q8N5B7 392 aa20.92■□□□□ 0.94
NEDD4-212ENST00000557845 PITPNM2Q9BZ72 1349 aa20.92■□□□□ 0.94
NEDD4-212ENST00000557845 FKBP1AP62942 108 aaKnown RBP20.91■□□□□ 0.94
NEDD4-212ENST00000557845 GRM1Q13255 1194 aa20.91■□□□□ 0.94
NEDD4-212ENST00000557845 VGLL2Q8N8G2 317 aa20.91■□□□□ 0.94
NEDD4-212ENST00000557845 TDRD7Q8NHU6 1098 aaKnown RBP20.91■□□□□ 0.94
NEDD4-212ENST00000557845 PTPN12Q05209 780 aaKnown RBP20.9■□□□□ 0.94
NEDD4-212ENST00000557845 C2orf69Q8N8R5 385 aa20.9■□□□□ 0.94
NEDD4-212ENST00000557845 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
NEDD4-212ENST00000557845 CDCA5Q96FF9 252 aa20.9■□□□□ 0.94
NEDD4-212ENST00000557845 GBA2Q9HCG7 927 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms