RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 Q6ZUG5 572 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 PEX19P40855 299 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 CAPZA3Q96KX2 299 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 NSD2O96028 1365 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 TMEM232C9JQI7 657 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 HNRNPH1P31943 449 aaKnown RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 SATB1Q01826 763 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 FAM169AQ9Y6X4 670 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 GOLGA6L9A6NEM1 432 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 CLNS1AP54105 237 aaKnown RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 CEP112Q8N8E3 955 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 FAM76AQ8TAV0 307 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 CDK19Q9BWU1 502 aa13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.14□□□□□ -0.31
RPGRIP1-213ENST00000557771 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 CPLX1O14810 134 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 EPB41L2O43491 1005 aaKnown RBP13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 FAM71BQ8TC56 605 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 POLD4Q9HCU8 107 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 SLC27A2O14975 620 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 TFRCP02786 760 aaKnown RBP13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 ACTN3Q08043 901 aaPredicted RBP13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 FANCLQ9NW38 375 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 NDUFAB1O14561 156 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 CCDC175P0C221 793 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 NDUFA8P51970 172 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 CCDC148Q8NFR7 591 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 DPF2Q92785 391 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
RPGRIP1-213ENST00000557771 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 SYNJ2O15056 1496 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 SRGAP1Q7Z6B7 1085 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 KIRREL3Q8IZU9 778 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 PLCD4Q9BRC7 762 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 DISP1Q96F81 1524 aa13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-213ENST00000557771 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 VSNL1P62760 191 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 E2F5Q15329 346 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 ECHDC1Q9NTX5 307 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 FOXO3O43524 673 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 GNGT1P63211 74 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 NEK1Q96PY6 1258 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 PNKPQ96T60 521 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 ODF2LQ9ULJ1 636 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 MRFAP1Q9Y605 127 aa13.11□□□□□ -0.31
RPGRIP1-213ENST00000557771 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 ANXA1P04083 346 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 G3BP1Q13283 466 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 TRIM65Q6PJ69 517 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 PIK3R5Q8WYR1 880 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 VWA3AA6NCI4 1184 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 KIF1CO43896 1103 aaKnown RBP13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 MYL5Q02045 173 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 RESTQ13127 1097 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 TRMT44Q8IYL2 757 aaKnown RBP13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 STAP2Q9UGK3 403 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 MYO5CQ9NQX4 1742 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 MYO1FO00160 1098 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 PSME1Q06323 249 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 SF3A3Q12874 501 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 STIM1Q13586 685 aa13.1□□□□□ -0.31
RPGRIP1-213ENST00000557771 MTF1Q14872 753 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms