RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FBXW7Q969H0 707 aa18.61■□□□□ 0.57
SHMT2-235ENST00000557740 ANKRD2Q9GZV1 360 aa18.61■□□□□ 0.57
SHMT2-235ENST00000557740 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
SHMT2-235ENST00000557740 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
SHMT2-235ENST00000557740 CSF1RP07333 972 aa18.6■□□□□ 0.57
SHMT2-235ENST00000557740 KCNJ4P48050 445 aa18.6■□□□□ 0.57
SHMT2-235ENST00000557740 C2orf69Q8N8R5 385 aa18.6■□□□□ 0.57
SHMT2-235ENST00000557740 COA1Q9GZY4 146 aa18.6■□□□□ 0.57
SHMT2-235ENST00000557740 GBA2Q9HCG7 927 aaPredicted RBP18.6■□□□□ 0.57
SHMT2-235ENST00000557740 CHMP3Q9Y3E7 222 aa18.6■□□□□ 0.57
SHMT2-235ENST00000557740 SPEF2Q9C093 1822 aa18.6■□□□□ 0.57
SHMT2-235ENST00000557740 ZNF804BA4D1E1 1349 aa18.59■□□□□ 0.57
SHMT2-235ENST00000557740 ANKRD18BA2A2Z9 1011 aa18.59■□□□□ 0.57
SHMT2-235ENST00000557740 BEND3Q5T5X7 828 aa18.59■□□□□ 0.57
SHMT2-235ENST00000557740 GMLQ99445 158 aa18.59■□□□□ 0.57
SHMT2-235ENST00000557740 MYOZ2Q9NPC6 264 aa18.59■□□□□ 0.57
SHMT2-235ENST00000557740 ASTN2O75129 1339 aaPredicted RBP18.58■□□□□ 0.57
SHMT2-235ENST00000557740 SCARF1Q14162 830 aa18.58■□□□□ 0.56
SHMT2-235ENST00000557740 ANGEL2Q5VTE6 544 aaKnown RBP18.58■□□□□ 0.56
SHMT2-235ENST00000557740 CACNA1FO60840 1977 aa18.58■□□□□ 0.56
SHMT2-235ENST00000557740 MYO3BQ8WXR4 1341 aa18.57■□□□□ 0.56
SHMT2-235ENST00000557740 BRPF1P55201 1214 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-235ENST00000557740 CHRNDQ07001 517 aa18.57■□□□□ 0.56
SHMT2-235ENST00000557740 NOGQ13253 232 aa18.57■□□□□ 0.56
SHMT2-235ENST00000557740 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
SHMT2-235ENST00000557740 OGFOD1Q8N543 542 aa18.57■□□□□ 0.56
SHMT2-235ENST00000557740 GRM8O00222 908 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 CA12O43570 354 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 DACT2Q5SW24 774 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 STRIP1Q5VSL9 837 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 TXNRD3Q86VQ6 643 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 PSME4Q14997 1843 aa18.56■□□□□ 0.56
SHMT2-235ENST00000557740 KLRK1P26718 216 aa18.55■□□□□ 0.56
SHMT2-235ENST00000557740 FOXO4P98177 505 aa18.55■□□□□ 0.56
SHMT2-235ENST00000557740 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
SHMT2-235ENST00000557740 SLC4A10Q6U841 1118 aa18.55■□□□□ 0.56
SHMT2-235ENST00000557740 MXD3Q9BW11 206 aa18.55■□□□□ 0.56
SHMT2-235ENST00000557740 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
SHMT2-235ENST00000557740 PITPNM2Q9BZ72 1349 aa18.54■□□□□ 0.56
SHMT2-235ENST00000557740 ALDH1L1O75891 902 aa18.54■□□□□ 0.56
SHMT2-235ENST00000557740 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
SHMT2-235ENST00000557740 LMBR1LQ6UX01 489 aa18.54■□□□□ 0.56
SHMT2-235ENST00000557740 SRCIN1Q9C0H9 1055 aa18.54■□□□□ 0.56
SHMT2-235ENST00000557740 TSKSQ9UJT2 592 aa18.54■□□□□ 0.56
SHMT2-235ENST00000557740 ZNF521Q96K83 1311 aa18.53■□□□□ 0.56
SHMT2-235ENST00000557740 ZNF157P51786 506 aaPredicted RBP18.53■□□□□ 0.56
SHMT2-235ENST00000557740 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
SHMT2-235ENST00000557740 TTLL5Q6EMB2 1281 aa18.53■□□□□ 0.56
SHMT2-235ENST00000557740 CCDC102AQ96A19 550 aa18.53■□□□□ 0.56
SHMT2-235ENST00000557740 HELBQ8NG08 1087 aaPredicted RBP18.52■□□□□ 0.56
SHMT2-235ENST00000557740 TAF5LO75529 589 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 MMP14P50281 582 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 GTF2IP78347 998 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 NBPF9Q3BBW0 867 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 EPHA10Q5JZY3 1008 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 ZNF804AQ7Z570 1209 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 HDAC9Q9UKV0 1011 aa18.51■□□□□ 0.55
SHMT2-235ENST00000557740 FAM155AB1AL88 458 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-235ENST00000557740 FKBP1BP68106 108 aa18.5■□□□□ 0.55
SHMT2-235ENST00000557740 LDHAL6AQ6ZMR3 332 aa18.5■□□□□ 0.55
SHMT2-235ENST00000557740 KIAA0825Q8IV33 1275 aa18.5■□□□□ 0.55
SHMT2-235ENST00000557740 ZIC5Q96T25 663 aa18.5■□□□□ 0.55
SHMT2-235ENST00000557740 CD209Q9NNX6 404 aa18.5■□□□□ 0.55
SHMT2-235ENST00000557740 CNNM1Q9NRU3 951 aa18.5■□□□□ 0.55
SHMT2-235ENST00000557740 E9PSI1 815 aa18.49■□□□□ 0.55
SHMT2-235ENST00000557740 SNAP23O00161 211 aa18.49■□□□□ 0.55
SHMT2-235ENST00000557740 WNT10BO00744 389 aa18.49■□□□□ 0.55
SHMT2-235ENST00000557740 SASH1O94885 1247 aa18.49■□□□□ 0.55
SHMT2-235ENST00000557740 C15orf52Q6ZUT6 534 aaKnown RBP18.49■□□□□ 0.55
SHMT2-235ENST00000557740 ZNF594Q96JF6 807 aaPredicted RBP18.49■□□□□ 0.55
SHMT2-235ENST00000557740 POLR2AP24928 1970 aaKnown RBP18.49■□□□□ 0.55
SHMT2-235ENST00000557740 PLIN1O60240 522 aa18.48■□□□□ 0.55
SHMT2-235ENST00000557740 SLC10A3P09131 477 aa18.48■□□□□ 0.55
SHMT2-235ENST00000557740 NF2P35240 595 aa18.48■□□□□ 0.55
SHMT2-235ENST00000557740 SCAF8Q9UPN6 1271 aaKnown RBP18.48■□□□□ 0.55
SHMT2-235ENST00000557740 IRS2Q9Y4H2 1338 aa18.48■□□□□ 0.55
SHMT2-235ENST00000557740 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
SHMT2-235ENST00000557740 KIF23Q02241 960 aaPredicted RBP18.47■□□□□ 0.55
SHMT2-235ENST00000557740 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
SHMT2-235ENST00000557740 ABHD8Q96I13 439 aa18.47■□□□□ 0.55
SHMT2-235ENST00000557740 SUCLG2Q96I99 432 aa18.47■□□□□ 0.55
SHMT2-235ENST00000557740 PTPRCP08575 1304 aa18.47■□□□□ 0.55
SHMT2-235ENST00000557740 PRAMEF18Q5VWM3 479 aa18.46■□□□□ 0.55
SHMT2-235ENST00000557740 APOBEC3FQ8IUX4 373 aaKnown RBP18.46■□□□□ 0.55
SHMT2-235ENST00000557740 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.55
SHMT2-235ENST00000557740 ZNF646O15015 1829 aaPredicted RBP18.46■□□□□ 0.55
SHMT2-235ENST00000557740 NBPF7P0C2Y1 421 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-235ENST00000557740 IL1R1P14778 569 aa18.45■□□□□ 0.54
SHMT2-235ENST00000557740 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
SHMT2-235ENST00000557740 SAGE1Q9NXZ1 904 aa18.45■□□□□ 0.54
SHMT2-235ENST00000557740 DLGAP5Q15398 846 aa18.44■□□□□ 0.54
SHMT2-235ENST00000557740 CERS5Q8N5B7 392 aa18.44■□□□□ 0.54
SHMT2-235ENST00000557740 UTYO14607 1347 aa18.44■□□□□ 0.54
SHMT2-235ENST00000557740 F8W031 263 aaPredicted RBP18.43■□□□□ 0.54
SHMT2-235ENST00000557740 MOB2Q70IA6 237 aa18.43■□□□□ 0.54
SHMT2-235ENST00000557740 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
SHMT2-235ENST00000557740 ZBED3Q96IU2 234 aaPredicted RBP18.43■□□□□ 0.54
SHMT2-235ENST00000557740 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
SHMT2-235ENST00000557740 A0A1B0GUL6 1792 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms