RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
ARHGEF40-208ENST00000557498 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 H0YIN7 160 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 GOLIM4O00461 696 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 ALDH1B1P30837 517 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 MCAMP43121 646 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 KBTBD3Q8NAB2 608 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 MTFR1LQ9H019 292 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
ARHGEF40-208ENST00000557498 ZBTB7AO95365 584 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 GPSM2P81274 684 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 TICAM2Q86XR7 235 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 ANKIB1Q9P2G1 1089 aa17.54■□□□□ 0.4
ARHGEF40-208ENST00000557498 IRS2Q9Y4H2 1338 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 WTIPA6NIX2 430 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 REC8O95072 547 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 ZAP70P43403 619 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 BCAMP50895 628 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 ATP6V0A2Q9Y487 856 aa17.53■□□□□ 0.4
ARHGEF40-208ENST00000557498 SGSM2O43147 1006 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 KLRK1P26718 216 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 POLD1P28340 1107 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 GYG1P46976 350 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 PI16Q6UXB8 463 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 C22orf23Q9BZE7 217 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 PODXL2Q9NZ53 605 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 MYH7P12883 1935 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.4
ARHGEF40-208ENST00000557498 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 RAD50Q92878 1312 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 CHRNA5P30532 468 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 NMIQ13287 307 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 RASGRF1Q13972 1273 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 C15orf52Q6ZUT6 534 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 FBXO33Q7Z6M2 555 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 SPATA5Q8NB90 893 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 FAM84BQ96KN1 310 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 GGA1Q9UJY5 639 aa17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-208ENST00000557498 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 ZBTB22O15209 634 aa17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 UFL1O94874 794 aa17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 TTF1Q15361 905 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 IL25Q9H293 177 aa17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 COL1A1P02452 1464 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-208ENST00000557498 DUOX1Q9NRD9 1551 aa17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 SEMA3EO15041 775 aa17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 CYP2E1P05181 493 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 VPS37DQ86XT2 251 aa17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 FAM227BQ96M60 508 aa17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 MED23Q9ULK4 1368 aa17.49■□□□□ 0.39
ARHGEF40-208ENST00000557498 A0A0D9SFI3 127 aa17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 HIBADHP31937 336 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 PRPF40BQ6NWY9 871 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 TMX4Q9H1E5 349 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 PIH1D3Q9NQM4 214 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
ARHGEF40-208ENST00000557498 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 RNF113AO15541 343 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 EPB41L2O43491 1005 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 ZFYP08048 801 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 TXNRD3Q86VQ6 643 aa17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 MYO5AQ9Y4I1 1855 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-208ENST00000557498 ZMYM1Q5SVZ6 1142 aa17.46■□□□□ 0.39
ARHGEF40-208ENST00000557498 ZSCAN25Q6NSZ9 544 aa17.46■□□□□ 0.39
ARHGEF40-208ENST00000557498 MPNDQ8N594 471 aa17.46■□□□□ 0.39
ARHGEF40-208ENST00000557498 GPR101Q96P66 508 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF40-208ENST00000557498 SGIP1Q9BQI5 828 aa17.46■□□□□ 0.39
ARHGEF40-208ENST00000557498 POLLQ9UGP5 575 aa17.46■□□□□ 0.39
ARHGEF40-208ENST00000557498 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 CHGBP05060 677 aa17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 DPP8Q6V1X1 898 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms