RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
PCNX1-215ENST00000557428 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
PCNX1-215ENST00000557428 FZD1Q9UP38 647 aa10.5□□□□□ -0.73
PCNX1-215ENST00000557428 ZNF609O15014 1411 aa10.5□□□□□ -0.73
PCNX1-215ENST00000557428 ZNF646O15015 1829 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-215ENST00000557428 EN2P19622 333 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-215ENST00000557428 FXR1P51114 621 aaKnown RBP eCLIP10.49□□□□□ -0.73
PCNX1-215ENST00000557428 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
PCNX1-215ENST00000557428 CCDC152Q4G0S7 254 aa10.49□□□□□ -0.73
PCNX1-215ENST00000557428 NOM1Q5C9Z4 860 aaKnown RBP10.49□□□□□ -0.73
PCNX1-215ENST00000557428 INTS3Q68E01 1043 aaKnown RBP10.49□□□□□ -0.73
PCNX1-215ENST00000557428 OGFOD1Q8N543 542 aa10.49□□□□□ -0.73
PCNX1-215ENST00000557428 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
PCNX1-215ENST00000557428 JARID2Q92833 1246 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-215ENST00000557428 XDHP47989 1333 aa10.49□□□□□ -0.73
PCNX1-215ENST00000557428 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
PCNX1-215ENST00000557428 SPRYD7Q5W111 196 aa10.48□□□□□ -0.73
PCNX1-215ENST00000557428 RIC3Q7Z5B4 369 aa10.48□□□□□ -0.73
PCNX1-215ENST00000557428 ANKRD18AQ8IVF6 992 aa10.48□□□□□ -0.73
PCNX1-215ENST00000557428 GMLQ99445 158 aa10.48□□□□□ -0.73
PCNX1-215ENST00000557428 MYH3P11055 1940 aa10.48□□□□□ -0.73
PCNX1-215ENST00000557428 MANSC4A6NHS7 340 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-215ENST00000557428 WNT10BO00744 389 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 MYCP01106 439 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-215ENST00000557428 ATP2B4P23634 1241 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 APOBEC3FQ8IUX4 373 aaKnown RBP10.47□□□□□ -0.73
PCNX1-215ENST00000557428 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 ERO1AQ96HE7 468 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 MYD88Q99836 296 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 ECM29Q5VYK3 1845 aa10.47□□□□□ -0.73
PCNX1-215ENST00000557428 KIAA0100Q14667 2235 aaKnown RBP10.46□□□□□ -0.73
PCNX1-215ENST00000557428 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.73
PCNX1-215ENST00000557428 PODNQ7Z5L7 613 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 KIAA0825Q8IV33 1275 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 CCDC146Q8IYE0 955 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 ZBTB38Q8NAP3 1195 aaPredicted RBP10.46□□□□□ -0.73
PCNX1-215ENST00000557428 WNK4Q96J92 1243 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 CFHR5Q9BXR6 569 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 BABAM1Q9NWV8 329 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 DBF4Q9UBU7 674 aaPredicted RBP10.46□□□□□ -0.73
PCNX1-215ENST00000557428 COLQQ9Y215 455 aaPredicted RBP10.46□□□□□ -0.73
PCNX1-215ENST00000557428 PTPN22Q9Y2R2 807 aa10.46□□□□□ -0.73
PCNX1-215ENST00000557428 MED23Q9ULK4 1368 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 MYO3BQ8WXR4 1341 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 WTIPA6NIX2 430 aaPredicted RBP10.45□□□□□ -0.74
PCNX1-215ENST00000557428 IGF2BP3O00425 579 aaKnown RBP eCLIP10.45□□□□□ -0.74
PCNX1-215ENST00000557428 PDE8AO60658 829 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 TMPOP42166 694 aaKnown RBP10.45□□□□□ -0.74
PCNX1-215ENST00000557428 SLC4A8Q2Y0W8 1093 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 DACT2Q5SW24 774 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 CLMNQ96JQ2 1002 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 HYPKQ9NX55 129 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
PCNX1-215ENST00000557428 LAMB1P07942 1786 aa10.44□□□□□ -0.74
PCNX1-215ENST00000557428 BRCA2P51587 3418 aa10.44□□□□□ -0.74
PCNX1-215ENST00000557428 CRHR2Q13324 411 aa10.44□□□□□ -0.74
PCNX1-215ENST00000557428 OTUD7BQ6GQQ9 843 aa10.44□□□□□ -0.74
PCNX1-215ENST00000557428 CDC5LQ99459 802 aaKnown RBP10.44□□□□□ -0.74
PCNX1-215ENST00000557428 CWC25Q9NXE8 425 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-215ENST00000557428 COL1A1P02452 1464 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-215ENST00000557428 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-215ENST00000557428 INHBEP58166 350 aa10.43□□□□□ -0.74
PCNX1-215ENST00000557428 SLC9C1Q4G0N8 1177 aa10.43□□□□□ -0.74
PCNX1-215ENST00000557428 LDLRAD1Q5T700 205 aa10.43□□□□□ -0.74
PCNX1-215ENST00000557428 VEZTQ9HBM0 779 aa10.43□□□□□ -0.74
PCNX1-215ENST00000557428 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 CLRN2A0PK11 232 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 F8W031 263 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-215ENST00000557428 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-215ENST00000557428 PCCAP05165 728 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-215ENST00000557428 ZBTB48P10074 688 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-215ENST00000557428 KCNJ4P48050 445 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 CCT4P50991 539 aaKnown RBP10.42□□□□□ -0.74
PCNX1-215ENST00000557428 CTSWP56202 376 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 GTF2IP78347 998 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 SP3Q02447 781 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 DLGAP5Q15398 846 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 STRIP1Q5VSL9 837 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 TTLL5Q6EMB2 1281 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 ARMC5Q96C12 935 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 COA1Q9GZY4 146 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 DEFB129Q9H1M3 183 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 PHAXQ9H814 394 aaKnown RBP10.42□□□□□ -0.74
PCNX1-215ENST00000557428 SSC5DA1L4H1 1573 aa10.42□□□□□ -0.74
PCNX1-215ENST00000557428 H0YGN5 161 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 CHL1O00533 1208 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 HOXB7P09629 217 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 KLRK1P26718 216 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 IREB2P48200 963 aaKnown RBP10.41□□□□□ -0.74
PCNX1-215ENST00000557428 TRIM28Q13263 835 aaKnown RBP10.41□□□□□ -0.74
PCNX1-215ENST00000557428 CHRDL2Q6WN34 429 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 NBPF11Q86T75 865 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 CCDC191Q8NCU4 936 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 ELP3Q9H9T3 547 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms