RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MMP14P50281 582 aa17.24■□□□□ 0.35
VPS33B-206ENST00000557358 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
VPS33B-206ENST00000557358 VPS37DQ86XT2 251 aa17.24■□□□□ 0.35
VPS33B-206ENST00000557358 OGFOD1Q8N543 542 aa17.24■□□□□ 0.35
VPS33B-206ENST00000557358 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
VPS33B-206ENST00000557358 ZC3H15Q8WU90 426 aaKnown RBP17.24■□□□□ 0.35
VPS33B-206ENST00000557358 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
VPS33B-206ENST00000557358 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
VPS33B-206ENST00000557358 C15orf52Q6ZUT6 534 aaKnown RBP17.23■□□□□ 0.35
VPS33B-206ENST00000557358 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
VPS33B-206ENST00000557358 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
VPS33B-206ENST00000557358 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
VPS33B-206ENST00000557358 HDAC9Q9UKV0 1011 aa17.22■□□□□ 0.35
VPS33B-206ENST00000557358 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
VPS33B-206ENST00000557358 USP17L8P0C7I0 530 aa17.21■□□□□ 0.35
VPS33B-206ENST00000557358 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
VPS33B-206ENST00000557358 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
VPS33B-206ENST00000557358 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
VPS33B-206ENST00000557358 MEIS3Q99687 375 aa17.21■□□□□ 0.35
VPS33B-206ENST00000557358 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
VPS33B-206ENST00000557358 KCNQ5Q9NR82 932 aa17.21■□□□□ 0.35
VPS33B-206ENST00000557358 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
VPS33B-206ENST00000557358 SCN9AQ15858 1988 aa17.2■□□□□ 0.34
VPS33B-206ENST00000557358 PSME4Q14997 1843 aa17.2■□□□□ 0.34
VPS33B-206ENST00000557358 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
VPS33B-206ENST00000557358 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
VPS33B-206ENST00000557358 GNAI2P04899 355 aa17.2■□□□□ 0.34
VPS33B-206ENST00000557358 IFIT1P09914 478 aaKnown RBP17.2■□□□□ 0.34
VPS33B-206ENST00000557358 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
VPS33B-206ENST00000557358 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
VPS33B-206ENST00000557358 RIPOR2Q9Y4F9 1068 aa17.2■□□□□ 0.34
VPS33B-206ENST00000557358 EYA2O00167 538 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 HIBADHP31937 336 aaKnown RBP17.19■□□□□ 0.34
VPS33B-206ENST00000557358 GTF2IP78347 998 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
VPS33B-206ENST00000557358 CDC37L1Q7L3B6 337 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 TXNRD3Q86VQ6 643 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 ITPRIPQ8IWB1 547 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 PUS3Q9BZE2 481 aaKnown RBP17.19■□□□□ 0.34
VPS33B-206ENST00000557358 ZNF609O15014 1411 aa17.19■□□□□ 0.34
VPS33B-206ENST00000557358 ADAMTSL1Q8N6G6 1762 aa17.18■□□□□ 0.34
VPS33B-206ENST00000557358 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
VPS33B-206ENST00000557358 PDE8BO95263 885 aa17.18■□□□□ 0.34
VPS33B-206ENST00000557358 ITGBL1O95965 494 aaPredicted RBP17.18■□□□□ 0.34
VPS33B-206ENST00000557358 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
VPS33B-206ENST00000557358 LRRC24Q50LG9 513 aa17.18■□□□□ 0.34
VPS33B-206ENST00000557358 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
VPS33B-206ENST00000557358 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
VPS33B-206ENST00000557358 PASKQ96RG2 1323 aa17.18■□□□□ 0.34
VPS33B-206ENST00000557358 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 CIAO1O76071 339 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 SLC5A1P13866 664 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 IL1R1P14778 569 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 KLRK1P26718 216 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 DACT2Q5SW24 774 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
VPS33B-206ENST00000557358 KLHDC4Q8TBB5 520 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 A0A1B0GUL6 1792 aa17.17■□□□□ 0.34
VPS33B-206ENST00000557358 SNAP23O00161 211 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 IL15P40933 162 aaPredicted RBP17.16■□□□□ 0.34
VPS33B-206ENST00000557358 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
VPS33B-206ENST00000557358 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
VPS33B-206ENST00000557358 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 KLRG1Q96E93 195 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 SIL1Q9H173 461 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
VPS33B-206ENST00000557358 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 PGAP2Q9UHJ9 254 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
VPS33B-206ENST00000557358 ABT1Q9ULW3 272 aaKnown RBP17.16■□□□□ 0.34
VPS33B-206ENST00000557358 SASH1O94885 1247 aa17.15■□□□□ 0.34
VPS33B-206ENST00000557358 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
VPS33B-206ENST00000557358 HTRA3P83110 453 aa17.15■□□□□ 0.34
VPS33B-206ENST00000557358 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
VPS33B-206ENST00000557358 LPIN2Q92539 896 aa17.15■□□□□ 0.34
VPS33B-206ENST00000557358 SHTN1A0MZ66 631 aa17.14■□□□□ 0.33
VPS33B-206ENST00000557358 GYG1P46976 350 aa17.14■□□□□ 0.33
VPS33B-206ENST00000557358 HIRAP54198 1017 aaPredicted RBP17.14■□□□□ 0.33
VPS33B-206ENST00000557358 FKBP1AP62942 108 aaKnown RBP17.14■□□□□ 0.33
VPS33B-206ENST00000557358 GMLQ99445 158 aa17.14■□□□□ 0.33
VPS33B-206ENST00000557358 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
VPS33B-206ENST00000557358 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
VPS33B-206ENST00000557358 TRPM7Q96QT4 1865 aa17.14■□□□□ 0.33
VPS33B-206ENST00000557358 MYO1BO43795 1136 aa17.13■□□□□ 0.33
VPS33B-206ENST00000557358 MTX1Q13505 466 aa17.13■□□□□ 0.33
VPS33B-206ENST00000557358 SCARF1Q14162 830 aa17.13■□□□□ 0.33
VPS33B-206ENST00000557358 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
VPS33B-206ENST00000557358 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
VPS33B-206ENST00000557358 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
VPS33B-206ENST00000557358 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
VPS33B-206ENST00000557358 AKAP2Q9Y2D5 859 aa17.13■□□□□ 0.33
VPS33B-206ENST00000557358 CEP350Q5VT06 3117 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
VPS33B-206ENST00000557358 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS33B-206ENST00000557358 DLGAP5Q15398 846 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
VPS33B-206ENST00000557358 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms