RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SCN9AQ15858 1988 aa20.85■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 EYA2O00167 538 aa20.84■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 SRGAP3O43295 1099 aa20.84■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 EPS15P42566 896 aa20.84■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 FSTL1Q12841 308 aa20.84■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 ZNF804AQ7Z570 1209 aa20.84■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 ZBTB12Q9Y330 459 aaPredicted RBP20.84■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 POTEIP0CG38 1075 aa20.83■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 POTEJP0CG39 1038 aa20.83■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 UBE4AQ14139 1066 aa20.83■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 LDHDQ86WU2 507 aa20.83■□□□□ 0.93
TVP23C-CDRT4-204ENST00000557349 USP17L3A6NCW0 530 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 USP17L4A6NCW7 530 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 RPS12P25398 132 aaKnown RBP20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 MTX1Q13505 466 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 C15orf52Q6ZUT6 534 aaKnown RBP20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 USP17L1Q7RTZ2 530 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 FBXO3Q9UK99 471 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 PA2G4Q9UQ80 394 aaKnown RBP20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 CLEC11AQ9Y240 323 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 PSME4Q14997 1843 aa20.82■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 PDE8BO95263 885 aa20.81■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 CHADLQ6NUI6 762 aa20.81■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 MICALL2Q8IY33 904 aa20.81■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 ADARB2Q9NS39 739 aaKnown RBP20.81■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 IRS2Q9Y4H2 1338 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 H7C1D1 291 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 CIAO1O76071 339 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 VIL1P09327 827 aaKnown RBP20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 MVPQ14764 893 aaKnown RBP20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 RSBN1LQ6PCB5 846 aaPredicted RBP20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 DPF2Q92785 391 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 CD209Q9NNX6 404 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 COPRSQ9NQ92 184 aa20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 CNOT7Q9UIV1 285 aaKnown RBP20.8■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 ZBTB7BO15156 539 aaPredicted RBP20.79■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 USP50Q70EL3 339 aaPredicted RBP20.79■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 ATG9AQ7Z3C6 839 aa20.79■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 ADAMTSL1Q8N6G6 1762 aa20.79■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 SHTN1A0MZ66 631 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 IL15P40933 162 aaPredicted RBP20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 VPS37DQ86XT2 251 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 AGBL3Q8NEM8 1001 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 DDX19BQ9UMR2 479 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 ZNF609O15014 1411 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 MYO3BQ8WXR4 1341 aa20.78■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 PNMA6EA0A0J9YXQ4 647 aa20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 IFIT1P09914 478 aaKnown RBP20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 HSPA6P17066 643 aa20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 GYG1P46976 350 aa20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 GTF2IP78347 998 aa20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 TTLL5Q6EMB2 1281 aa20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
TVP23C-CDRT4-204ENST00000557349 SLC5A1P13866 664 aa20.76■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 HIBADHP31937 336 aaKnown RBP20.76■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 CAVIN4Q5BKX8 364 aa20.76■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 DACT2Q5SW24 774 aa20.76■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 TRPM4Q8TD43 1214 aa20.76■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 IL1R1P14778 569 aa20.75■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 PDE3AQ14432 1141 aa20.75■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 MXD3Q9BW11 206 aa20.75■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 CHMP4BQ9H444 224 aaKnown RBP20.75■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 ZNF646O15015 1829 aaPredicted RBP20.75■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 USP17L8P0C7I0 530 aa20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 ATP2B3Q16720 1220 aa20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 TBC1D10BQ4KMP7 808 aaPredicted RBP20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 RBM26Q5T8P6 1007 aaKnown RBP20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 C20orf194Q5TEA3 1177 aa20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 MAP1SQ66K74 1059 aaPredicted RBP20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 SAMD7Q7Z3H4 446 aa20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 LPIN2Q92539 896 aa20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 FAM84BQ96KN1 310 aaPredicted RBP20.74■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 FGFR2P21802 821 aa20.73■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 ATP8B2P98198 1209 aa20.73■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 KIF4BQ2VIQ3 1234 aa20.73■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 JAG2Q9Y219 1238 aa20.73■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 G3BP1Q13283 466 aaKnown RBP eCLIP20.72■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 OS9Q13438 667 aaPredicted RBP20.72■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 POLA2Q14181 598 aa20.72■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 CEP85Q6P2H3 762 aa20.72■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 OGFOD1Q8N543 542 aa20.72■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 GMLQ99445 158 aa20.72■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 APLP1P51693 650 aa20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 FBXO33Q7Z6M2 555 aa20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 KIAA0825Q8IV33 1275 aa20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 TDRD7Q8NHU6 1098 aaKnown RBP20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 SSH3Q8TE77 659 aa20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 IQSEC3Q9UPP2 1182 aaPredicted RBP20.71■□□□□ 0.91
TVP23C-CDRT4-204ENST00000557349 SASH1O94885 1247 aa20.7■□□□□ 0.9
TVP23C-CDRT4-204ENST00000557349 EGFRP00533 1210 aa20.7■□□□□ 0.9
TVP23C-CDRT4-204ENST00000557349 BCAMP50895 628 aa20.7■□□□□ 0.9
TVP23C-CDRT4-204ENST00000557349 HIRAP54198 1017 aaPredicted RBP20.7■□□□□ 0.9
TVP23C-CDRT4-204ENST00000557349 RRP1P56182 461 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms