RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
RDH11-210ENST00000557331 SCN9AQ15858 1988 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 GPR25O00155 361 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 FKTNO75072 461 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 NEXNQ0ZGT2 675 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 MYD88Q99836 296 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 MBIPQ9NS73 344 aa13.16□□□□□ -0.3
RDH11-210ENST00000557331 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
RDH11-210ENST00000557331 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.3
RDH11-210ENST00000557331 ANKRD2Q9GZV1 360 aa13.15□□□□□ -0.3
RDH11-210ENST00000557331 PSME4Q14997 1843 aa13.15□□□□□ -0.3
RDH11-210ENST00000557331 ASTN2O75129 1339 aaPredicted RBP13.14□□□□□ -0.31
RDH11-210ENST00000557331 WNT10BO00744 389 aa13.14□□□□□ -0.31
RDH11-210ENST00000557331 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
RDH11-210ENST00000557331 CTSWP56202 376 aa13.14□□□□□ -0.31
RDH11-210ENST00000557331 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
RDH11-210ENST00000557331 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
RDH11-210ENST00000557331 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
RDH11-210ENST00000557331 MANSC4A6NHS7 340 aaPredicted RBP13.13□□□□□ -0.31
RDH11-210ENST00000557331 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
RDH11-210ENST00000557331 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 ZBTB48P10074 688 aaPredicted RBP13.13□□□□□ -0.31
RDH11-210ENST00000557331 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
RDH11-210ENST00000557331 NBPF9Q3BBW0 867 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 TTLL11Q8NHH1 800 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
RDH11-210ENST00000557331 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
RDH11-210ENST00000557331 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
RDH11-210ENST00000557331 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
RDH11-210ENST00000557331 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
RDH11-210ENST00000557331 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
RDH11-210ENST00000557331 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
RDH11-210ENST00000557331 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
RDH11-210ENST00000557331 MYO1BO43795 1136 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 MAP3K11Q16584 847 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 MPHOSPH8Q99549 860 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
RDH11-210ENST00000557331 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
RDH11-210ENST00000557331 MOB2Q70IA6 237 aa13.1□□□□□ -0.31
RDH11-210ENST00000557331 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
RDH11-210ENST00000557331 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
RDH11-210ENST00000557331 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
RDH11-210ENST00000557331 PI4KAP2A4QPH2 592 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 KCNJ4P48050 445 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 DLGAP5Q15398 846 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 PI4KAP1Q8N8J0 262 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 GREM2Q9H772 168 aa13.09□□□□□ -0.31
RDH11-210ENST00000557331 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
RDH11-210ENST00000557331 H7C1W4 665 aa13.08□□□□□ -0.32
RDH11-210ENST00000557331 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
RDH11-210ENST00000557331 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
RDH11-210ENST00000557331 PRAMEF18Q5VWM3 479 aa13.08□□□□□ -0.32
RDH11-210ENST00000557331 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
RDH11-210ENST00000557331 ZBED3Q96IU2 234 aaPredicted RBP13.08□□□□□ -0.32
RDH11-210ENST00000557331 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
RDH11-210ENST00000557331 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.32
RDH11-210ENST00000557331 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
RDH11-210ENST00000557331 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
RDH11-210ENST00000557331 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
RDH11-210ENST00000557331 COL4A1P02462 1669 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 APAF1O14727 1248 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
RDH11-210ENST00000557331 SASH1O94885 1247 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 ITGA6P23229 1130 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 GTF2IP78347 998 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 CENPFP49454 3210 aa13.06□□□□□ -0.32
RDH11-210ENST00000557331 MYH3P11055 1940 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 CSF1RP07333 972 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
RDH11-210ENST00000557331 OTOP1Q7RTM1 612 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 ZNF804AQ7Z570 1209 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
RDH11-210ENST00000557331 CD209Q9NNX6 404 aa13.05□□□□□ -0.32
RDH11-210ENST00000557331 HTTP42858 3142 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
RDH11-210ENST00000557331 GCKRQ14397 625 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
RDH11-210ENST00000557331 ANKRD13AQ8IZ07 590 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms