RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 FAM89AQ96GI7 184 aa26.65■■□□□ 1.86
RCCD1-208ENST00000557266 ZSCAN16Q9H4T2 348 aaPredicted RBP26.65■■□□□ 1.86
RCCD1-208ENST00000557266 ASAP1Q9ULH1 1129 aa26.65■■□□□ 1.86
RCCD1-208ENST00000557266 PCCAP05165 728 aaPredicted RBP26.65■■□□□ 1.86
RCCD1-208ENST00000557266 TYRO3Q06418 890 aa26.65■■□□□ 1.86
RCCD1-208ENST00000557266 XAGE2Q96GT9 111 aa26.65■■□□□ 1.86
RCCD1-208ENST00000557266 ZNF830Q96NB3 372 aaPredicted RBP26.65■■□□□ 1.86
RCCD1-208ENST00000557266 FBXO3Q9UK99 471 aa26.65■■□□□ 1.86
RCCD1-208ENST00000557266 MRVI1Q9Y6F6 885 aa26.65■■□□□ 1.86
RCCD1-208ENST00000557266 TTLL5Q6EMB2 1281 aa26.64■■□□□ 1.86
RCCD1-208ENST00000557266 CCDC85AQ96PX6 553 aaPredicted RBP26.64■■□□□ 1.86
RCCD1-208ENST00000557266 TNMDQ9H2S6 317 aa26.64■■□□□ 1.86
RCCD1-208ENST00000557266 DDX19AQ9NUU7 478 aaKnown RBP26.64■■□□□ 1.86
RCCD1-208ENST00000557266 PTPDC1A2A3K4 754 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 PIGBQ92521 554 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 PLA2G12BQ9BX93 195 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 CCDC158Q5M9N0 1113 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 TTC39AQ5SRH9 613 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 RBM43Q6ZSC3 357 aaKnown RBP26.63■■□□□ 1.85
RCCD1-208ENST00000557266 CLSTN2Q9H4D0 955 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 BTG4Q9NY30 223 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 AKAP2Q9Y2D5 859 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 PLCH1Q4KWH8 1693 aa26.63■■□□□ 1.85
RCCD1-208ENST00000557266 FOXP2O15409 715 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 CSF1RP07333 972 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 CCT2P78371 535 aaKnown RBP26.62■■□□□ 1.85
RCCD1-208ENST00000557266 NAA16Q6N069 864 aaPredicted RBP26.62■■□□□ 1.85
RCCD1-208ENST00000557266 KIF6Q6ZMV9 814 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 CKAP2LQ8IYA6 745 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 VSIG10Q8N0Z9 540 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 FAM200AQ8TCP9 573 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 SALL1Q9NSC2 1324 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 NR1I2O75469 434 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 PLCB2Q00722 1185 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 SCARF1Q14162 830 aa26.62■■□□□ 1.85
RCCD1-208ENST00000557266 ZBTB38Q8NAP3 1195 aaPredicted RBP26.62■■□□□ 1.85
RCCD1-208ENST00000557266 TTC12Q9H892 705 aaPredicted RBP26.62■■□□□ 1.85
RCCD1-208ENST00000557266 ADD1P35611 737 aaKnown RBP26.61■■□□□ 1.85
RCCD1-208ENST00000557266 HMGN5P82970 282 aaKnown RBP26.61■■□□□ 1.85
RCCD1-208ENST00000557266 GORABQ5T7V8 394 aa26.61■■□□□ 1.85
RCCD1-208ENST00000557266 CHST3Q7LGC8 479 aa26.61■■□□□ 1.85
RCCD1-208ENST00000557266 NCOA5Q9HCD5 579 aaKnown RBP26.61■■□□□ 1.85
RCCD1-208ENST00000557266 BICD2Q8TD16 824 aa26.6■■□□□ 1.85
RCCD1-208ENST00000557266 TEX13AQ9BXU3 409 aaPredicted RBP26.6■■□□□ 1.85
RCCD1-208ENST00000557266 PDIA3P30101 505 aaKnown RBP26.6■■□□□ 1.85
RCCD1-208ENST00000557266 CFAP45Q9UL16 551 aa26.6■■□□□ 1.85
RCCD1-208ENST00000557266 RIC1Q4ADV7 1423 aa26.6■■□□□ 1.85
RCCD1-208ENST00000557266 FOSBP53539 338 aa26.59■■□□□ 1.85
RCCD1-208ENST00000557266 IFIT5Q13325 482 aaKnown RBP26.59■■□□□ 1.85
RCCD1-208ENST00000557266 ZNF274Q96GC6 653 aaPredicted RBP26.59■■□□□ 1.85
RCCD1-208ENST00000557266 LRRFIP1Q32MZ4 808 aaKnown RBP26.59■■□□□ 1.85
RCCD1-208ENST00000557266 TAF7LQ5H9L4 462 aa26.59■■□□□ 1.85
RCCD1-208ENST00000557266 SYNE4Q8N205 404 aa26.59■■□□□ 1.85
RCCD1-208ENST00000557266 PIBF1Q8WXW3 757 aa26.59■■□□□ 1.85
RCCD1-208ENST00000557266 MAP3K15Q6ZN16 1313 aa26.58■■□□□ 1.85
RCCD1-208ENST00000557266 ZFYP08048 801 aaPredicted RBP26.58■■□□□ 1.85
RCCD1-208ENST00000557266 ZAP70P43403 619 aa26.57■■□□□ 1.84
RCCD1-208ENST00000557266 WASHC4Q2M389 1173 aa26.57■■□□□ 1.84
RCCD1-208ENST00000557266 GIGYF2Q6Y7W6 1299 aaKnown RBP26.57■■□□□ 1.84
RCCD1-208ENST00000557266 FBXL16Q8N461 479 aa26.57■■□□□ 1.84
RCCD1-208ENST00000557266 STARD3NLO95772 234 aa26.57■■□□□ 1.84
RCCD1-208ENST00000557266 HLFQ16534 295 aa26.57■■□□□ 1.84
RCCD1-208ENST00000557266 NAP1L2Q9ULW6 460 aaPredicted RBP26.57■■□□□ 1.84
RCCD1-208ENST00000557266 KIF3AQ9Y496 699 aa26.57■■□□□ 1.84
RCCD1-208ENST00000557266 ANO6Q4KMQ2 910 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 PI16Q6UXB8 463 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 LUZP1Q86V48 1076 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 FTOQ9C0B1 505 aaKnown RBP eCLIP26.56■■□□□ 1.84
RCCD1-208ENST00000557266 NRAPQ86VF7 1730 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 NWD2Q9ULI1 1742 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 PPFIA3O75145 1194 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 CEBPZQ03701 1054 aaKnown RBP26.56■■□□□ 1.84
RCCD1-208ENST00000557266 GPHNQ9NQX3 736 aaPredicted RBP26.56■■□□□ 1.84
RCCD1-208ENST00000557266 CTNNA3Q9UI47 895 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 ABCC12Q96J65 1359 aa26.56■■□□□ 1.84
RCCD1-208ENST00000557266 CDHR2Q9BYE9 1310 aa26.55■■□□□ 1.84
RCCD1-208ENST00000557266 EVCP57679 992 aa26.55■■□□□ 1.84
RCCD1-208ENST00000557266 HSP90AB3PQ58FF7 597 aa26.55■■□□□ 1.84
RCCD1-208ENST00000557266 CBX8Q9HC52 389 aa26.55■■□□□ 1.84
RCCD1-208ENST00000557266 RIPOR2Q9Y4F9 1068 aa26.55■■□□□ 1.84
RCCD1-208ENST00000557266 GPTP24298 496 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 HAND2P61296 217 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 NLRP10Q86W26 655 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 APPBP2Q92624 585 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 PUS7LQ9H0K6 701 aaKnown RBP26.54■■□□□ 1.84
RCCD1-208ENST00000557266 RCOR1Q9UKL0 485 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 RRP9O43818 475 aaKnown RBP26.54■■□□□ 1.84
RCCD1-208ENST00000557266 ADAMTS2O95450 1211 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 FGAP02671 866 aa26.54■■□□□ 1.84
RCCD1-208ENST00000557266 IMMTQ16891 758 aaKnown RBP26.54■■□□□ 1.84
RCCD1-208ENST00000557266 CARMIL3Q8ND23 1372 aa26.53■■□□□ 1.84
RCCD1-208ENST00000557266 ATP2B3Q16720 1220 aa26.53■■□□□ 1.84
RCCD1-208ENST00000557266 TTLL11Q8NHH1 800 aa26.53■■□□□ 1.84
RCCD1-208ENST00000557266 GREM2Q9H772 168 aa26.53■■□□□ 1.84
RCCD1-208ENST00000557266 ITGA6P23229 1130 aa26.53■■□□□ 1.84
RCCD1-208ENST00000557266 NOLC1Q14978 699 aaKnown RBP eCLIP26.53■■□□□ 1.845e-8■□□□□ 10.4
RCCD1-208ENST00000557266 METTL24Q5JXM2 366 aa26.53■■□□□ 1.84
RCCD1-208ENST00000557266 ILDR1Q86SU0 546 aaPredicted RBP26.53■■□□□ 1.84
RCCD1-208ENST00000557266 C17orf53Q8N3J3 647 aaPredicted RBP26.53■■□□□ 1.84
RCCD1-208ENST00000557266 FDPSP14324 419 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms