RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GGA3Q9NZ52 723 aa20.26■□□□□ 0.83
TUBB3-213ENST00000557262 POLR2AP24928 1970 aaKnown RBP20.26■□□□□ 0.83
TUBB3-213ENST00000557262 ZNF609O15014 1411 aa20.26■□□□□ 0.83
TUBB3-213ENST00000557262 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
TUBB3-213ENST00000557262 NOGQ13253 232 aa20.25■□□□□ 0.83
TUBB3-213ENST00000557262 FAM9BQ8IZU0 186 aa20.25■□□□□ 0.83
TUBB3-213ENST00000557262 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
TUBB3-213ENST00000557262 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
TUBB3-213ENST00000557262 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
TUBB3-213ENST00000557262 ASTN2O75129 1339 aaPredicted RBP20.25■□□□□ 0.83
TUBB3-213ENST00000557262 CA12O43570 354 aa20.24■□□□□ 0.83
TUBB3-213ENST00000557262 RGMBQ6NW40 437 aa20.24■□□□□ 0.83
TUBB3-213ENST00000557262 MYOZ2Q9NPC6 264 aa20.24■□□□□ 0.83
TUBB3-213ENST00000557262 MYH3P11055 1940 aa20.23■□□□□ 0.83
TUBB3-213ENST00000557262 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
TUBB3-213ENST00000557262 ANGEL2Q5VTE6 544 aaKnown RBP20.23■□□□□ 0.83
TUBB3-213ENST00000557262 ZNF804BA4D1E1 1349 aa20.23■□□□□ 0.83
TUBB3-213ENST00000557262 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
TUBB3-213ENST00000557262 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 F6X3S4 739 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 BEND3Q5T5X7 828 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 STRIP1Q5VSL9 837 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 TXNRD3Q86VQ6 643 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 CCDC102AQ96A19 550 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 TSKSQ9UJT2 592 aa20.22■□□□□ 0.83
TUBB3-213ENST00000557262 DACT2Q5SW24 774 aa20.21■□□□□ 0.83
TUBB3-213ENST00000557262 OGFOD1Q8N543 542 aa20.21■□□□□ 0.83
TUBB3-213ENST00000557262 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
TUBB3-213ENST00000557262 ZIC5Q96T25 663 aa20.21■□□□□ 0.83
TUBB3-213ENST00000557262 FAM155AB1AL88 458 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-213ENST00000557262 ZNF157P51786 506 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-213ENST00000557262 FOXO4P98177 505 aa20.2■□□□□ 0.82
TUBB3-213ENST00000557262 CHRNDQ07001 517 aa20.2■□□□□ 0.82
TUBB3-213ENST00000557262 FBXW7Q969H0 707 aa20.2■□□□□ 0.82
TUBB3-213ENST00000557262 MXD3Q9BW11 206 aa20.2■□□□□ 0.82
TUBB3-213ENST00000557262 MYO3BQ8WXR4 1341 aa20.2■□□□□ 0.82
TUBB3-213ENST00000557262 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
TUBB3-213ENST00000557262 PSME4Q14997 1843 aa20.19■□□□□ 0.82
TUBB3-213ENST00000557262 MMP14P50281 582 aa20.19■□□□□ 0.82
TUBB3-213ENST00000557262 IFIT5Q13325 482 aaKnown RBP20.19■□□□□ 0.82
TUBB3-213ENST00000557262 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
TUBB3-213ENST00000557262 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
TUBB3-213ENST00000557262 KCNJ4P48050 445 aa20.18■□□□□ 0.82
TUBB3-213ENST00000557262 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
TUBB3-213ENST00000557262 ABHD8Q96I13 439 aa20.18■□□□□ 0.82
TUBB3-213ENST00000557262 KLRK1P26718 216 aa20.17■□□□□ 0.82
TUBB3-213ENST00000557262 FKBP1BP68106 108 aa20.17■□□□□ 0.82
TUBB3-213ENST00000557262 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-213ENST00000557262 CHMP3Q9Y3E7 222 aa20.17■□□□□ 0.82
TUBB3-213ENST00000557262 GRM8O00222 908 aa20.16■□□□□ 0.82
TUBB3-213ENST00000557262 LMBR1LQ6UX01 489 aa20.16■□□□□ 0.82
TUBB3-213ENST00000557262 CD209Q9NNX6 404 aa20.16■□□□□ 0.82
TUBB3-213ENST00000557262 WNT10BO00744 389 aa20.15■□□□□ 0.82
TUBB3-213ENST00000557262 TAF5LO75529 589 aa20.15■□□□□ 0.82
TUBB3-213ENST00000557262 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
TUBB3-213ENST00000557262 GTF2IP78347 998 aa20.15■□□□□ 0.82
TUBB3-213ENST00000557262 C15orf52Q6ZUT6 534 aaKnown RBP20.15■□□□□ 0.82
TUBB3-213ENST00000557262 HELBQ8NG08 1087 aaPredicted RBP20.15■□□□□ 0.82
TUBB3-213ENST00000557262 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
TUBB3-213ENST00000557262 HDAC9Q9UKV0 1011 aa20.15■□□□□ 0.82
TUBB3-213ENST00000557262 SLC10A3P09131 477 aa20.14■□□□□ 0.81
TUBB3-213ENST00000557262 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.81
TUBB3-213ENST00000557262 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.81
TUBB3-213ENST00000557262 SLC4A10Q6U841 1118 aa20.14■□□□□ 0.81
TUBB3-213ENST00000557262 SCAF8Q9UPN6 1271 aaKnown RBP20.14■□□□□ 0.81
TUBB3-213ENST00000557262 SNAP23O00161 211 aa20.13■□□□□ 0.81
TUBB3-213ENST00000557262 LDHAL6AQ6ZMR3 332 aa20.13■□□□□ 0.81
TUBB3-213ENST00000557262 KIAA0825Q8IV33 1275 aa20.13■□□□□ 0.81
TUBB3-213ENST00000557262 SRCIN1Q9C0H9 1055 aa20.13■□□□□ 0.81
TUBB3-213ENST00000557262 IRS2Q9Y4H2 1338 aa20.12■□□□□ 0.81
TUBB3-213ENST00000557262 PRAMEF18Q5VWM3 479 aa20.12■□□□□ 0.81
TUBB3-213ENST00000557262 REM2Q8IYK8 340 aaPredicted RBP20.12■□□□□ 0.81
TUBB3-213ENST00000557262 ZNF594Q96JF6 807 aaPredicted RBP20.12■□□□□ 0.81
TUBB3-213ENST00000557262 CSRNP1Q96S65 589 aa20.12■□□□□ 0.81
TUBB3-213ENST00000557262 SAGE1Q9NXZ1 904 aa20.12■□□□□ 0.81
TUBB3-213ENST00000557262 ZNF521Q96K83 1311 aa20.11■□□□□ 0.81
TUBB3-213ENST00000557262 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
TUBB3-213ENST00000557262 CNNM1Q9NRU3 951 aa20.11■□□□□ 0.81
TUBB3-213ENST00000557262 RNF186Q9NXI6 227 aa20.11■□□□□ 0.81
TUBB3-213ENST00000557262 UBE2Q2LH0YL09 131 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 PLIN1O60240 522 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 SASH1O94885 1247 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 IL1R1P14778 569 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 NF2P35240 595 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 ZNF804AQ7Z570 1209 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 RASAL3Q86YV0 1011 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
TUBB3-213ENST00000557262 CASP8AP2Q9UKL3 1982 aa20.1■□□□□ 0.81
TUBB3-213ENST00000557262 TRPA1O75762 1119 aa20.09■□□□□ 0.81
TUBB3-213ENST00000557262 MOB2Q70IA6 237 aa20.09■□□□□ 0.81
TUBB3-213ENST00000557262 CCDC85CA6NKD9 419 aa20.08■□□□□ 0.81
TUBB3-213ENST00000557262 TTLL12Q14166 644 aaPredicted RBP20.08■□□□□ 0.81
TUBB3-213ENST00000557262 DLGAP5Q15398 846 aa20.08■□□□□ 0.81
TUBB3-213ENST00000557262 APOBEC3FQ8IUX4 373 aaKnown RBP20.08■□□□□ 0.81
TUBB3-213ENST00000557262 CERS5Q8N5B7 392 aa20.08■□□□□ 0.81
TUBB3-213ENST00000557262 MCOLN1Q9GZU1 580 aa20.08■□□□□ 0.81
TUBB3-213ENST00000557262 ZNF646O15015 1829 aaPredicted RBP20.08■□□□□ 0.8
TUBB3-213ENST00000557262 FKBP1AP62942 108 aaKnown RBP20.07■□□□□ 0.8
TUBB3-213ENST00000557262 DGKZQ13574 1117 aa20.07■□□□□ 0.8
TUBB3-213ENST00000557262 MRPL50Q8N5N7 158 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms