RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
RIPK3-205ENST00000557253 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
RIPK3-205ENST00000557253 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
RIPK3-205ENST00000557253 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
RIPK3-205ENST00000557253 ZNF646O15015 1829 aaPredicted RBP12.49□□□□□ -0.41
RIPK3-205ENST00000557253 SPEF2Q9C093 1822 aa12.49□□□□□ -0.41
RIPK3-205ENST00000557253 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
RIPK3-205ENST00000557253 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
RIPK3-205ENST00000557253 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
RIPK3-205ENST00000557253 OGFOD1Q8N543 542 aa12.49□□□□□ -0.41
RIPK3-205ENST00000557253 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
RIPK3-205ENST00000557253 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
RIPK3-205ENST00000557253 PCCAP05165 728 aaPredicted RBP12.48□□□□□ -0.41
RIPK3-205ENST00000557253 HOXB7P09629 217 aa12.48□□□□□ -0.41
RIPK3-205ENST00000557253 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
RIPK3-205ENST00000557253 MKI67P46013 3256 aaKnown RBP12.47□□□□□ -0.41
RIPK3-205ENST00000557253 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 EN2P19622 333 aaPredicted RBP12.47□□□□□ -0.41
RIPK3-205ENST00000557253 LDLRAD1Q5T700 205 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 CCDC191Q8NCU4 936 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 SLC10A4Q96EP9 437 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 CWC25Q9NXE8 425 aaPredicted RBP12.47□□□□□ -0.41
RIPK3-205ENST00000557253 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
RIPK3-205ENST00000557253 HTTP42858 3142 aa12.46□□□□□ -0.41
RIPK3-205ENST00000557253 IGF2BP3O00425 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
RIPK3-205ENST00000557253 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.41
RIPK3-205ENST00000557253 CCT4P50991 539 aaKnown RBP12.46□□□□□ -0.41
RIPK3-205ENST00000557253 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
RIPK3-205ENST00000557253 INTS3Q68E01 1043 aaKnown RBP12.46□□□□□ -0.41
RIPK3-205ENST00000557253 APOBEC3FQ8IUX4 373 aaKnown RBP12.46□□□□□ -0.41
RIPK3-205ENST00000557253 CD99L2Q8TCZ2 262 aa12.46□□□□□ -0.41
RIPK3-205ENST00000557253 CLMNQ96JQ2 1002 aa12.46□□□□□ -0.41
RIPK3-205ENST00000557253 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
RIPK3-205ENST00000557253 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
RIPK3-205ENST00000557253 CENPFP49454 3210 aa12.46□□□□□ -0.42
RIPK3-205ENST00000557253 MYO3BQ8WXR4 1341 aa12.45□□□□□ -0.42
RIPK3-205ENST00000557253 MANSC4A6NHS7 340 aaPredicted RBP12.45□□□□□ -0.42
RIPK3-205ENST00000557253 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
RIPK3-205ENST00000557253 TTLL5Q6EMB2 1281 aa12.45□□□□□ -0.42
RIPK3-205ENST00000557253 WNK4Q96J92 1243 aa12.45□□□□□ -0.42
RIPK3-205ENST00000557253 CDC5LQ99459 802 aaKnown RBP12.45□□□□□ -0.42
RIPK3-205ENST00000557253 GREM2Q9H772 168 aa12.45□□□□□ -0.42
RIPK3-205ENST00000557253 BRCA2P51587 3418 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 KLRK1P26718 216 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 CTSWP56202 376 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 GTF2IP78347 998 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 TTLL11Q8NHH1 800 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
RIPK3-205ENST00000557253 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
RIPK3-205ENST00000557253 COA1Q9GZY4 146 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
RIPK3-205ENST00000557253 PCDHAC2Q9Y5I4 1007 aa12.44□□□□□ -0.42
RIPK3-205ENST00000557253 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
RIPK3-205ENST00000557253 INHBEP58166 350 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 CAP1Q01518 475 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 CRHR2Q13324 411 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
RIPK3-205ENST00000557253 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 SSC5DA1L4H1 1573 aa12.43□□□□□ -0.42
RIPK3-205ENST00000557253 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
RIPK3-205ENST00000557253 ZBTB48P10074 688 aaPredicted RBP12.42□□□□□ -0.42
RIPK3-205ENST00000557253 GJA5P36382 358 aa12.42□□□□□ -0.42
RIPK3-205ENST00000557253 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
RIPK3-205ENST00000557253 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
RIPK3-205ENST00000557253 ZNF804BA4D1E1 1349 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
RIPK3-205ENST00000557253 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
RIPK3-205ENST00000557253 MYCP01106 439 aaPredicted RBP12.41□□□□□ -0.42
RIPK3-205ENST00000557253 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 MAP3K11Q16584 847 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
RIPK3-205ENST00000557253 ARMC5Q96C12 935 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 PTPN18Q99952 460 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 TMEM106CQ9BVX2 250 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 VEZTQ9HBM0 779 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
RIPK3-205ENST00000557253 SNAP23O00161 211 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 IGHMBP2P38935 993 aaKnown RBP12.4□□□□□ -0.42
RIPK3-205ENST00000557253 MMP14P50281 582 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 SP3Q02447 781 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 RALBP1Q15311 655 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
RIPK3-205ENST00000557253 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 MYH3P11055 1940 aa12.4□□□□□ -0.42
RIPK3-205ENST00000557253 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.43
RIPK3-205ENST00000557253 AOX1Q06278 1338 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 LAMB1P07942 1786 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 USP2O75604 605 aaPredicted RBP12.39□□□□□ -0.43
RIPK3-205ENST00000557253 ZNF853P0CG23 659 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 KCNJ4P48050 445 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms