RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 SEPT12Q8IYM1 358 aa14.69□□□□□ -0.06
APEX1-216ENST00000557159 BICD2Q8TD16 824 aa14.69□□□□□ -0.06
APEX1-216ENST00000557159 ZNF446Q9NWS9 450 aa14.69□□□□□ -0.06
APEX1-216ENST00000557159 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 MED23Q9ULK4 1368 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 USP27XA6NNY8 438 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
APEX1-216ENST00000557159 KRT32Q14532 448 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 CCDC150Q8NCX0 1101 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 IPO4Q8TEX9 1081 aaKnown RBP14.68□□□□□ -0.06
APEX1-216ENST00000557159 BPIFA3Q9BQP9 254 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 NOL10Q9BSC4 688 aaKnown RBP14.68□□□□□ -0.06
APEX1-216ENST00000557159 SRRTQ9BXP5 876 aaKnown RBP14.68□□□□□ -0.06
APEX1-216ENST00000557159 RCOR1Q9UKL0 485 aa14.68□□□□□ -0.06
APEX1-216ENST00000557159 WNK3Q9BYP7 1800 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 CCP110O43303 1012 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 TOB2Q14106 344 aaPredicted RBP14.67□□□□□ -0.06
APEX1-216ENST00000557159 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 FILIP1Q7Z7B0 1213 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 FERMT3Q86UX7 667 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 ZNF592Q92610 1267 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 LLPHQ9BRT6 129 aaKnown RBP14.67□□□□□ -0.06
APEX1-216ENST00000557159 FHOD1Q9Y613 1164 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 PARP4Q9UKK3 1724 aaKnown RBP14.67□□□□□ -0.06
APEX1-216ENST00000557159 ADAMTS7Q9UKP4 1686 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 HEG1Q9ULI3 1381 aa14.67□□□□□ -0.06
APEX1-216ENST00000557159 A0A0G2JS52 829 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 ZRANB2O95218 330 aaKnown RBP eCLIP14.66□□□□□ -0.064e-6■■■□□ 18.5
APEX1-216ENST00000557159 TPM1P09493 284 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 MUM1L1Q5H9M0 696 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 BEND3Q5T5X7 828 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 USPL1Q5W0Q7 1092 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 DHX40Q8IX18 779 aaKnown RBP14.66□□□□□ -0.06
APEX1-216ENST00000557159 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 NAT10Q9H0A0 1025 aaKnown RBP14.66□□□□□ -0.06
APEX1-216ENST00000557159 TNS2Q63HR2 1409 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 CYP27B1O15528 508 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 NAA16Q6N069 864 aaPredicted RBP14.66□□□□□ -0.06
APEX1-216ENST00000557159 FAM173BQ6P4H8 233 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 UBXN6Q9BZV1 441 aa14.66□□□□□ -0.06
APEX1-216ENST00000557159 ARGLU1Q9NWB6 273 aaPredicted RBP14.66□□□□□ -0.06
APEX1-216ENST00000557159 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.66□□□□□ -0.06
APEX1-216ENST00000557159 RFX7Q2KHR2 1363 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 BECN2A8MW95 431 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 NRDCO43847 1150 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 EIF2S2P20042 333 aaKnown RBP14.65□□□□□ -0.06
APEX1-216ENST00000557159 SNW1Q13573 536 aaKnown RBP14.65□□□□□ -0.06
APEX1-216ENST00000557159 TEX35Q5T0J7 233 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 C11orf57Q6ZUT1 292 aaPredicted RBP14.65□□□□□ -0.06
APEX1-216ENST00000557159 CEP57L1Q8IYX8 460 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 DNAAF4Q8WXU2 420 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 TFIP11Q9UBB9 837 aaKnown RBP14.65□□□□□ -0.06
APEX1-216ENST00000557159 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 PKD1L3Q7Z443 1732 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 PHLPP2Q6ZVD8 1323 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 PCDH11XQ9BZA7 1347 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 PCDH11YQ9BZA8 1340 aa14.65□□□□□ -0.06
APEX1-216ENST00000557159 TPM4P67936 248 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 SMARCC2Q8TAQ2 1214 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 DDX54Q8TDD1 881 aaKnown RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 SIPA1L3O60292 1781 aaPredicted RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 PNMA6AP0CW24 399 aaPredicted RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 ADD1P35611 737 aaKnown RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 FAM160A1Q05DH4 1040 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 E4F1Q66K89 784 aaPredicted RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 IFNL2Q8IZJ0 200 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 TXLNBQ8N3L3 684 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 PHAXQ9H814 394 aaKnown RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 CHPF2Q9P2E5 772 aa14.64□□□□□ -0.07
APEX1-216ENST00000557159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.64□□□□□ -0.072e-8■□□□□ 10.2
APEX1-216ENST00000557159 V9GYY5 206 aaPredicted RBP14.64□□□□□ -0.07
APEX1-216ENST00000557159 MRC1P22897 1456 aa14.63□□□□□ -0.07
APEX1-216ENST00000557159 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
APEX1-216ENST00000557159 NBPF7P0C2Y1 421 aaPredicted RBP14.63□□□□□ -0.07
APEX1-216ENST00000557159 PHKG2P15735 406 aa14.63□□□□□ -0.07
APEX1-216ENST00000557159 CLCN6P51797 869 aa14.63□□□□□ -0.07
APEX1-216ENST00000557159 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
APEX1-216ENST00000557159 USP16Q9Y5T5 823 aa14.63□□□□□ -0.07
APEX1-216ENST00000557159 SHANK3Q9BYB0 1731 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 DDX58O95786 925 aaKnown RBP14.62□□□□□ -0.07
APEX1-216ENST00000557159 ARID5BQ14865 1188 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 NKX1-1Q15270 411 aaPredicted RBP14.62□□□□□ -0.07
APEX1-216ENST00000557159 CCDC73Q6ZRK6 1079 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 NBPF11Q86T75 865 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 PPP1R13BQ96KQ4 1090 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 PI4KAP2A4QPH2 592 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
APEX1-216ENST00000557159 PLA2G4AP47712 749 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 PDE4CQ08493 712 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 NMIQ13287 307 aaPredicted RBP14.62□□□□□ -0.07
APEX1-216ENST00000557159 KRT27Q7Z3Y8 459 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 PI4KAP1Q8N8J0 262 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 BRF1Q92994 677 aa14.62□□□□□ -0.07
APEX1-216ENST00000557159 CAPN2P17655 700 aa14.61□□□□□ -0.07
APEX1-216ENST00000557159 ERCC6LQ2NKX8 1250 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms