RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
PSEN1-219ENST00000556951 AGBL3Q8NEM8 1001 aa16.48■□□□□ 0.23
PSEN1-219ENST00000556951 PLBD2Q8NHP8 589 aa16.48■□□□□ 0.23
PSEN1-219ENST00000556951 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
PSEN1-219ENST00000556951 ZNF609O15014 1411 aa16.47■□□□□ 0.23
PSEN1-219ENST00000556951 TRIM28Q13263 835 aaKnown RBP16.47■□□□□ 0.23
PSEN1-219ENST00000556951 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
PSEN1-219ENST00000556951 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
PSEN1-219ENST00000556951 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
PSEN1-219ENST00000556951 SEC31BQ9NQW1 1179 aa16.47■□□□□ 0.23
PSEN1-219ENST00000556951 CHL1O00533 1208 aa16.46■□□□□ 0.23
PSEN1-219ENST00000556951 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
PSEN1-219ENST00000556951 PRAMEF18Q5VWM3 479 aa16.46■□□□□ 0.23
PSEN1-219ENST00000556951 Q7L0L9 218 aa16.46■□□□□ 0.23
PSEN1-219ENST00000556951 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
PSEN1-219ENST00000556951 IRS4O14654 1257 aaPredicted RBP16.45■□□□□ 0.22
PSEN1-219ENST00000556951 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
PSEN1-219ENST00000556951 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
PSEN1-219ENST00000556951 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
PSEN1-219ENST00000556951 MTMR10Q9NXD2 777 aa16.45■□□□□ 0.22
PSEN1-219ENST00000556951 RAPGEFL1Q9UHV5 662 aa16.45■□□□□ 0.22
PSEN1-219ENST00000556951 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
PSEN1-219ENST00000556951 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-219ENST00000556951 ALDH1A1P00352 501 aa16.44■□□□□ 0.22
PSEN1-219ENST00000556951 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
PSEN1-219ENST00000556951 FAM122AQ96E09 287 aa16.44■□□□□ 0.22
PSEN1-219ENST00000556951 MYOZ2Q9NPC6 264 aa16.44■□□□□ 0.22
PSEN1-219ENST00000556951 UFL1O94874 794 aa16.43■□□□□ 0.22
PSEN1-219ENST00000556951 USP17L8P0C7I0 530 aa16.43■□□□□ 0.22
PSEN1-219ENST00000556951 NBPF9Q3BBW0 867 aa16.43■□□□□ 0.22
PSEN1-219ENST00000556951 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
PSEN1-219ENST00000556951 CD99L2Q8TCZ2 262 aa16.43■□□□□ 0.22
PSEN1-219ENST00000556951 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
PSEN1-219ENST00000556951 TTC28Q96AY4 2481 aa16.42■□□□□ 0.22
PSEN1-219ENST00000556951 MKRN3Q13064 507 aaKnown RBP16.42■□□□□ 0.22
PSEN1-219ENST00000556951 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
PSEN1-219ENST00000556951 NR2E3Q9Y5X4 410 aa16.42■□□□□ 0.22
PSEN1-219ENST00000556951 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
PSEN1-219ENST00000556951 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
PSEN1-219ENST00000556951 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
PSEN1-219ENST00000556951 PSME4Q14997 1843 aa16.4■□□□□ 0.22
PSEN1-219ENST00000556951 EYSQ5T1H1 3165 aa16.4■□□□□ 0.22
PSEN1-219ENST00000556951 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
PSEN1-219ENST00000556951 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
PSEN1-219ENST00000556951 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 G3V3G9 751 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 DCAF8Q5TAQ9 597 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-219ENST00000556951 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-219ENST00000556951 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
PSEN1-219ENST00000556951 WNT10BO00744 389 aa16.38■□□□□ 0.21
PSEN1-219ENST00000556951 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
PSEN1-219ENST00000556951 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
PSEN1-219ENST00000556951 HTATIP2Q9BUP3 242 aa16.38■□□□□ 0.21
PSEN1-219ENST00000556951 HOXB7P09629 217 aa16.37■□□□□ 0.21
PSEN1-219ENST00000556951 CAP1Q01518 475 aa16.37■□□□□ 0.21
PSEN1-219ENST00000556951 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
PSEN1-219ENST00000556951 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
PSEN1-219ENST00000556951 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
PSEN1-219ENST00000556951 MYCP01106 439 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-219ENST00000556951 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-219ENST00000556951 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
PSEN1-219ENST00000556951 LMOD3Q0VAK6 560 aa16.36■□□□□ 0.21
PSEN1-219ENST00000556951 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
PSEN1-219ENST00000556951 SHISA4Q96DD7 197 aa16.36■□□□□ 0.21
PSEN1-219ENST00000556951 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
PSEN1-219ENST00000556951 XDHP47989 1333 aa16.36■□□□□ 0.21
PSEN1-219ENST00000556951 ZNF646O15015 1829 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-219ENST00000556951 PRUNE2Q8WUY3 3088 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 PDE8AO60658 829 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 TTLL12Q14166 644 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-219ENST00000556951 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 DUSP27Q5VZP5 1158 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 IFNL1Q8IU54 200 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 ZBED3Q96IU2 234 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-219ENST00000556951 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-219ENST00000556951 STAP2Q9UGK3 403 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
PSEN1-219ENST00000556951 PTCH2Q9Y6C5 1203 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 LAMB1P07942 1786 aa16.35■□□□□ 0.21
PSEN1-219ENST00000556951 INHBEP58166 350 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 PRKG1Q13976 671 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 UBE2Q1Q7Z7E8 422 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
PSEN1-219ENST00000556951 SP3Q02447 781 aa16.33■□□□□ 0.2
PSEN1-219ENST00000556951 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
PSEN1-219ENST00000556951 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
PSEN1-219ENST00000556951 CCDC191Q8NCU4 936 aa16.33■□□□□ 0.2
PSEN1-219ENST00000556951 MYD88Q99836 296 aa16.33■□□□□ 0.2
PSEN1-219ENST00000556951 MINPP1Q9UNW1 487 aa16.33■□□□□ 0.2
PSEN1-219ENST00000556951 RPTORQ8N122 1335 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms