RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 GAS2L2Q8NHY3 880 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 PCMTD1Q96MG8 357 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-244ENST00000556898 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ATXN3-244ENST00000556898 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-244ENST00000556898 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
ATXN3-244ENST00000556898 MAN1A2O60476 641 aa6.92□□□□□ -1.3
ATXN3-244ENST00000556898 PHKG2P15735 406 aa6.92□□□□□ -1.3
ATXN3-244ENST00000556898 SH3RF1Q7Z6J0 888 aa6.92□□□□□ -1.3
ATXN3-244ENST00000556898 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-244ENST00000556898 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
ATXN3-244ENST00000556898 C1QTNF2Q9BXJ5 285 aa6.92□□□□□ -1.3
ATXN3-244ENST00000556898 MIS18AQ9NYP9 233 aa6.92□□□□□ -1.3
ATXN3-244ENST00000556898 LAS1LQ9Y4W2 734 aaKnown RBP6.92□□□□□ -1.3
ATXN3-244ENST00000556898 GNAT3A8MTJ3 354 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 BMP2P12643 396 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 GSK3AP49840 483 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 SLFN5Q08AF3 891 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 CCDC27Q2M243 656 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 BPHLQ86WA6 291 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 MEIOBQ8N635 442 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 GPR161Q8N6U8 529 aaKnown RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 ZCRB1Q8TBF4 217 aaKnown RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 SPG7Q9UQ90 795 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 KDM6AO15550 1401 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-244ENST00000556898 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-244ENST00000556898 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 DLG5Q8TDM6 1919 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 RNMTO43148 476 aaKnown RBP6.9□□□□□ -1.3
ATXN3-244ENST00000556898 KCNQ3O43525 872 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 KCNQ4P56696 695 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 AKAP4Q5JQC9 854 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 C1orf141Q5JVX7 400 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 SH3BP5LQ7L8J4 393 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 WDR63Q8IWG1 891 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 IFNL2Q8IZJ0 200 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-244ENST00000556898 TSC1Q92574 1164 aa6.9□□□□□ -1.3
ATXN3-244ENST00000556898 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-244ENST00000556898 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-244ENST00000556898 PKD1L3Q7Z443 1732 aa6.9□□□□□ -1.31
ATXN3-244ENST00000556898 WNK3Q9BYP7 1800 aa6.9□□□□□ -1.31
ATXN3-244ENST00000556898 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 KRT76Q01546 638 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 KRT24Q2M2I5 525 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 DUSP27Q5VZP5 1158 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 TRMT2AQ8IZ69 625 aaKnown RBP6.89□□□□□ -1.31
ATXN3-244ENST00000556898 RTF1Q92541 710 aaKnown RBP6.89□□□□□ -1.31
ATXN3-244ENST00000556898 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 MBIPQ9NS73 344 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-244ENST00000556898 FANCIQ9NVI1 1328 aa6.89□□□□□ -1.31
ATXN3-244ENST00000556898 PCDH11XQ9BZA7 1347 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 PCDH11YQ9BZA8 1340 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 ZNF853P0CG23 659 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 FSHRP23945 695 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 EXOSC9Q06265 439 aaKnown RBP6.88□□□□□ -1.31
ATXN3-244ENST00000556898 LMOD3Q0VAK6 560 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 CHD4Q14839 1912 aa6.88□□□□□ -1.31
ATXN3-244ENST00000556898 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 TOGARAM1Q9Y4F4 1720 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 CEMIPQ8WUJ3 1361 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 E9PSI1 815 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-244ENST00000556898 TCERG1O14776 1098 aaKnown RBP6.87□□□□□ -1.31
ATXN3-244ENST00000556898 HTATSF1O43719 755 aaKnown RBP6.87□□□□□ -1.31
ATXN3-244ENST00000556898 SLC39A6Q13433 755 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 NGEFQ8N5V2 710 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 TSPYL6Q8N831 410 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 NFATC2IPQ8NCF5 419 aa6.87□□□□□ -1.31
ATXN3-244ENST00000556898 IL16Q14005 1332 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 MAGEB6P1A0A0J9YX57 407 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 PRAMEF22A3QJZ6 481 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 CHL1O00533 1208 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 CENPBP07199 599 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-244ENST00000556898 RFC5P40937 340 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 GNAI1P63096 354 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 TEFQ10587 303 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 CBLBQ13191 982 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 TAF7Q15545 349 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-244ENST00000556898 VASH1Q7L8A9 365 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-244ENST00000556898 TRMT44Q8IYL2 757 aaKnown RBP6.86□□□□□ -1.31
ATXN3-244ENST00000556898 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 DCAF5Q96JK2 942 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 SLC52A2Q9HAB3 445 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 TSPYL4Q9UJ04 414 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 MAP4K5Q9Y4K4 846 aa6.86□□□□□ -1.31
ATXN3-244ENST00000556898 ADAMTS7Q9UKP4 1686 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms