RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 TRIM11Q96F44 468 aa10.38□□□□□ -0.75
LINC00871-204ENST00000556886 DZANK1Q9NVP4 752 aa10.38□□□□□ -0.75
LINC00871-204ENST00000556886 NID1P14543 1247 aa10.37□□□□□ -0.75
LINC00871-204ENST00000556886 BEND7Q8N7W2 519 aaPredicted RBP10.37□□□□□ -0.75
LINC00871-204ENST00000556886 SCARF2Q96GP6 870 aaPredicted RBP10.37□□□□□ -0.75
LINC00871-204ENST00000556886 HHIPQ96QV1 700 aa10.37□□□□□ -0.75
LINC00871-204ENST00000556886 ZKSCAN3Q9BRR0 538 aa10.37□□□□□ -0.75
LINC00871-204ENST00000556886 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
LINC00871-204ENST00000556886 TRIM33Q9UPN9 1127 aa10.37□□□□□ -0.75
LINC00871-204ENST00000556886 NFKBIEO00221 500 aa10.36□□□□□ -0.75
LINC00871-204ENST00000556886 GNB5O14775 395 aa10.36□□□□□ -0.75
LINC00871-204ENST00000556886 P4HBP07237 508 aaKnown RBP10.36□□□□□ -0.75
LINC00871-204ENST00000556886 ENOX2Q16206 610 aaKnown RBP10.36□□□□□ -0.75
LINC00871-204ENST00000556886 CEP135Q66GS9 1140 aa10.36□□□□□ -0.75
LINC00871-204ENST00000556886 GDF6Q6KF10 455 aaPredicted RBP10.36□□□□□ -0.75
LINC00871-204ENST00000556886 CCDC74AQ96AQ1 378 aa10.36□□□□□ -0.75
LINC00871-204ENST00000556886 OSMRQ99650 979 aa10.36□□□□□ -0.75
LINC00871-204ENST00000556886 NPHS2Q9NP85 383 aa10.36□□□□□ -0.75
LINC00871-204ENST00000556886 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
LINC00871-204ENST00000556886 SMNDC1O75940 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00871-204ENST00000556886 ADAMTSL4Q6UY14 1074 aa10.35□□□□□ -0.75
LINC00871-204ENST00000556886 NPAS4Q8IUM7 802 aa10.35□□□□□ -0.75
LINC00871-204ENST00000556886 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
LINC00871-204ENST00000556886 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
LINC00871-204ENST00000556886 IRS1P35568 1242 aa10.34□□□□□ -0.75
LINC00871-204ENST00000556886 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
LINC00871-204ENST00000556886 POP1Q99575 1024 aaKnown RBP10.34□□□□□ -0.75
LINC00871-204ENST00000556886 LACRTQ9GZZ8 138 aa10.34□□□□□ -0.75
LINC00871-204ENST00000556886 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
LINC00871-204ENST00000556886 A0A1W2PP55 124 aa10.33□□□□□ -0.76
LINC00871-204ENST00000556886 EPS8L3Q8TE67 593 aaKnown RBP10.33□□□□□ -0.76
LINC00871-204ENST00000556886 PLVAPQ9BX97 442 aa10.33□□□□□ -0.76
LINC00871-204ENST00000556886 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
LINC00871-204ENST00000556886 PDE2AO00408 941 aaPredicted RBP10.32□□□□□ -0.76
LINC00871-204ENST00000556886 MFAP1P55081 439 aaKnown RBP10.32□□□□□ -0.76
LINC00871-204ENST00000556886 SUZ12Q15022 739 aaKnown RBP10.32□□□□□ -0.76
LINC00871-204ENST00000556886 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
LINC00871-204ENST00000556886 PI16Q6UXB8 463 aa10.32□□□□□ -0.76
LINC00871-204ENST00000556886 PIK3R2O00459 728 aa10.31□□□□□ -0.76
LINC00871-204ENST00000556886 BAG6P46379 1132 aa10.31□□□□□ -0.76
LINC00871-204ENST00000556886 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
LINC00871-204ENST00000556886 DMRTC2Q8IXT2 367 aaPredicted RBP10.31□□□□□ -0.76
LINC00871-204ENST00000556886 TMEM102Q8N9M5 508 aaPredicted RBP10.31□□□□□ -0.76
LINC00871-204ENST00000556886 NXPE3Q969Y0 559 aa10.31□□□□□ -0.76
LINC00871-204ENST00000556886 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
LINC00871-204ENST00000556886 KIAA0319Q5VV43 1072 aa10.3□□□□□ -0.76
LINC00871-204ENST00000556886 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
LINC00871-204ENST00000556886 IL22RA1Q8N6P7 574 aa10.3□□□□□ -0.76
LINC00871-204ENST00000556886 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
LINC00871-204ENST00000556886 METTL12A8MUP2 240 aa10.29□□□□□ -0.76
LINC00871-204ENST00000556886 RNF225M0QZC1 329 aaPredicted RBP10.29□□□□□ -0.76
LINC00871-204ENST00000556886 PTPRAP18433 802 aa10.29□□□□□ -0.76
LINC00871-204ENST00000556886 COL8A1P27658 744 aa10.29□□□□□ -0.76
LINC00871-204ENST00000556886 COL19A1Q14993 1142 aa10.29□□□□□ -0.76
LINC00871-204ENST00000556886 BHLHE41Q9C0J9 482 aaPredicted RBP10.29□□□□□ -0.76
LINC00871-204ENST00000556886 LIN7BQ9HAP6 207 aa10.29□□□□□ -0.76
LINC00871-204ENST00000556886 CC2D2AQ9P2K1 1620 aa10.29□□□□□ -0.76
LINC00871-204ENST00000556886 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
LINC00871-204ENST00000556886 LDHBP07195 334 aaKnown RBP10.28□□□□□ -0.76
LINC00871-204ENST00000556886 ERCC3P19447 782 aa10.28□□□□□ -0.76
LINC00871-204ENST00000556886 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
LINC00871-204ENST00000556886 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC00871-204ENST00000556886 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
LINC00871-204ENST00000556886 TCF12Q99081 682 aa10.28□□□□□ -0.76
LINC00871-204ENST00000556886 EHD4Q9H223 541 aa10.28□□□□□ -0.76
LINC00871-204ENST00000556886 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
LINC00871-204ENST00000556886 NOP53Q9NZM5 478 aaKnown RBP10.28□□□□□ -0.76
LINC00871-204ENST00000556886 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 EPHA1P21709 976 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 CDC27P30260 824 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 ALG1LQ6GMV1 187 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 CCNJLQ8IV13 435 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 ASAP3Q8TDY4 903 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 FBF1Q8TES7 1133 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 ADAM19Q9H013 955 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.77
LINC00871-204ENST00000556886 A0A0A0MRY4 1105 aa10.26□□□□□ -0.77
LINC00871-204ENST00000556886 GRIA4P48058 902 aa10.26□□□□□ -0.77
LINC00871-204ENST00000556886 GRM2Q14416 872 aa10.26□□□□□ -0.77
LINC00871-204ENST00000556886 CACTIN-AS1Q8N1I8 211 aa10.26□□□□□ -0.77
LINC00871-204ENST00000556886 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
LINC00871-204ENST00000556886 CDC25BP30305 580 aa10.25□□□□□ -0.77
LINC00871-204ENST00000556886 TXNDC11Q6PKC3 985 aa10.25□□□□□ -0.77
LINC00871-204ENST00000556886 FBXO33Q7Z6M2 555 aa10.25□□□□□ -0.77
LINC00871-204ENST00000556886 SOX13Q9UN79 622 aa10.25□□□□□ -0.77
LINC00871-204ENST00000556886 PPME1Q9Y570 386 aa10.25□□□□□ -0.77
LINC00871-204ENST00000556886 LINC01387J3KSC0 135 aa10.24□□□□□ -0.77
LINC00871-204ENST00000556886 GSK3AP49840 483 aa10.24□□□□□ -0.77
LINC00871-204ENST00000556886 SPRED3Q2MJR0 410 aa10.24□□□□□ -0.77
LINC00871-204ENST00000556886 GLIS3Q8NEA6 775 aa10.24□□□□□ -0.77
LINC00871-204ENST00000556886 BSNDQ8WZ55 320 aa10.24□□□□□ -0.77
LINC00871-204ENST00000556886 MUC3BQ9H195 1237 aa10.24□□□□□ -0.77
LINC00871-204ENST00000556886 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
LINC00871-204ENST00000556886 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
LINC00871-204ENST00000556886 FAM177BA6PVY3 158 aa10.23□□□□□ -0.77
LINC00871-204ENST00000556886 PRPF40AO75400 957 aaKnown RBP10.23□□□□□ -0.77
LINC00871-204ENST00000556886 TAGLNQ01995 201 aaKnown RBP10.23□□□□□ -0.77
LINC00871-204ENST00000556886 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
LINC00871-204ENST00000556886 TRIM28Q13263 835 aaKnown RBP10.23□□□□□ -0.77
LINC00871-204ENST00000556886 FMR1NBQ8N0W7 255 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms