RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 SLC51AQ86UW1 340 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 DPF2Q92785 391 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
SCFD1-222ENST00000556768 GREM2Q9H772 168 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 CNOT7Q9UIV1 285 aaKnown RBP9.27□□□□□ -0.93
SCFD1-222ENST00000556768 CHMP3Q9Y3E7 222 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 WDR90Q96KV7 1748 aa9.27□□□□□ -0.93
SCFD1-222ENST00000556768 ITGBL1O95965 494 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-222ENST00000556768 ITGA6P23229 1130 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 IFIT5Q13325 482 aaKnown RBP9.26□□□□□ -0.93
SCFD1-222ENST00000556768 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 PLA2G12BQ9BX93 195 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 ANKRD2Q9GZV1 360 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 ANKRD18BA2A2Z9 1011 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 F6X3S4 739 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 KCNJ4P48050 445 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 CCDC57Q2TAC2 916 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 BEND3Q5T5X7 828 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
SCFD1-222ENST00000556768 PODNQ7Z5L7 613 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 JMYQ8N9B5 988 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 SRCIN1Q9C0H9 1055 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 ABT1Q9ULW3 272 aaKnown RBP9.26□□□□□ -0.93
SCFD1-222ENST00000556768 MINPP1Q9UNW1 487 aa9.26□□□□□ -0.93
SCFD1-222ENST00000556768 PASKQ96RG2 1323 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 YDJCA8MPS7 323 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 GRM8O00222 908 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 PSMD14O00487 310 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 ALDH1L1O75891 902 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 MICALL2Q8IY33 904 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
SCFD1-222ENST00000556768 LEMD3Q9Y2U8 911 aa9.25□□□□□ -0.93
SCFD1-222ENST00000556768 RTL9Q8NET4 1388 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 ARFGEF2Q9Y6D5 1785 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 ZNF521Q96K83 1311 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 TIAM2Q8IVF5 1701 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 CSF1RP07333 972 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 CCT4P50991 539 aaKnown RBP9.24□□□□□ -0.93
SCFD1-222ENST00000556768 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 GPIHBP1Q8IV16 184 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 MS4A4AQ96JQ5 239 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 PTPRCP08575 1304 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 VIL1P09327 827 aaKnown RBP9.24□□□□□ -0.93
SCFD1-222ENST00000556768 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-222ENST00000556768 SLFN5Q08AF3 891 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 DEFB115Q30KQ5 88 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 AGBL3Q8NEM8 1001 aa9.24□□□□□ -0.93
SCFD1-222ENST00000556768 DCPSQ96C86 337 aaKnown RBP9.24□□□□□ -0.93
SCFD1-222ENST00000556768 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-222ENST00000556768 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 MLLT3P42568 568 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-222ENST00000556768 ALDH1L2Q3SY69 923 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 LMBR1LQ6UX01 489 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 LDHAL6AQ6ZMR3 332 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
SCFD1-222ENST00000556768 CNNM1Q9NRU3 951 aa9.23□□□□□ -0.93
SCFD1-222ENST00000556768 ZNF804BA4D1E1 1349 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 ECE1P42892 770 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 CASP7P55210 303 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 TBC1D10BQ4KMP7 808 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-222ENST00000556768 RSBN1LQ6PCB5 846 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-222ENST00000556768 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 AIDAQ96BJ3 306 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 COA1Q9GZY4 146 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 KCNQ5Q9NR82 932 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 SMC4Q9NTJ3 1288 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 PGAP2Q9UHJ9 254 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 DICER1Q9UPY3 1922 aaKnown RBP9.22□□□□□ -0.93
SCFD1-222ENST00000556768 CACNA1SQ13698 1873 aa9.22□□□□□ -0.93
SCFD1-222ENST00000556768 MAP3K13O43283 966 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 CELF2O95319 508 aaKnown RBP9.21□□□□□ -0.93
SCFD1-222ENST00000556768 USP17L8P0C7I0 530 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 MMP14P50281 582 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 CHRNDQ07001 517 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 KRT26Q7Z3Y9 468 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 SULF1Q8IWU6 871 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.93
SCFD1-222ENST00000556768 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 HDAC5Q9UQL6 1122 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 ANKRD36CQ5JPF3 1778 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 CNTNAP1P78357 1384 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 COL4A5P29400 1685 aa9.21□□□□□ -0.93
SCFD1-222ENST00000556768 SCN4AP35499 1836 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 RASSF10A6NK89 507 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 TRIM66O15016 1216 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 FOXO4P98177 505 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 DIEXFQ68CQ4 756 aaKnown RBP9.21□□□□□ -0.94
SCFD1-222ENST00000556768 TTLL5Q6EMB2 1281 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 TRPM4Q8TD43 1214 aa9.21□□□□□ -0.94
SCFD1-222ENST00000556768 SSH1Q8WYL5 1049 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms