RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 GLIS2Q9BZE0 524 aaPredicted RBP20.29■□□□□ 0.84
TGFB3-206ENST00000556674 LEMD3Q9Y2U8 911 aa20.29■□□□□ 0.84
TGFB3-206ENST00000556674 SPEF2Q9C093 1822 aa20.28■□□□□ 0.84
TGFB3-206ENST00000556674 G3V3G9 751 aa20.28■□□□□ 0.84
TGFB3-206ENST00000556674 TNRC18O15417 2968 aaPredicted RBP20.28■□□□□ 0.84
TGFB3-206ENST00000556674 TAF7LQ5H9L4 462 aa20.28■□□□□ 0.84
TGFB3-206ENST00000556674 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
TGFB3-206ENST00000556674 CIAPIN1Q6FI81 312 aa20.28■□□□□ 0.84
TGFB3-206ENST00000556674 USP44Q9H0E7 712 aa20.28■□□□□ 0.84
TGFB3-206ENST00000556674 MED23Q9ULK4 1368 aa20.27■□□□□ 0.84
TGFB3-206ENST00000556674 CXCL9Q07325 125 aa20.27■□□□□ 0.84
TGFB3-206ENST00000556674 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
TGFB3-206ENST00000556674 SUCLG2Q96I99 432 aa20.27■□□□□ 0.84
TGFB3-206ENST00000556674 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
TGFB3-206ENST00000556674 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
TGFB3-206ENST00000556674 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
TGFB3-206ENST00000556674 INTS3Q68E01 1043 aaKnown RBP20.25■□□□□ 0.83
TGFB3-206ENST00000556674 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
TGFB3-206ENST00000556674 LDHAL6AQ6ZMR3 332 aa20.25■□□□□ 0.83
TGFB3-206ENST00000556674 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
TGFB3-206ENST00000556674 ZIC5Q96T25 663 aa20.25■□□□□ 0.83
TGFB3-206ENST00000556674 PGAP2Q9UHJ9 254 aa20.25■□□□□ 0.83
TGFB3-206ENST00000556674 ECE2O60344 883 aa20.24■□□□□ 0.83
TGFB3-206ENST00000556674 UBTFL1P0CB47 393 aaPredicted RBP20.24■□□□□ 0.83
TGFB3-206ENST00000556674 GMPSP49915 693 aaPredicted RBP20.24■□□□□ 0.83
TGFB3-206ENST00000556674 BICC1Q9H694 974 aaKnown RBP20.24■□□□□ 0.83
TGFB3-206ENST00000556674 DBNDD1Q9H9R9 158 aa20.24■□□□□ 0.83
TGFB3-206ENST00000556674 YDJCA8MPS7 323 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 BCAR3O75815 825 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 KCNJ4P48050 445 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 CHRNDQ07001 517 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 PODNQ7Z5L7 613 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 CNNM1Q9NRU3 951 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 ZNF804BA4D1E1 1349 aa20.23■□□□□ 0.83
TGFB3-206ENST00000556674 PDE4DIPQ5VU43 2346 aa20.22■□□□□ 0.83
TGFB3-206ENST00000556674 RAD17O75943 681 aa20.22■□□□□ 0.83
TGFB3-206ENST00000556674 TRIM27P14373 513 aa20.22■□□□□ 0.83
TGFB3-206ENST00000556674 RPS12P25398 132 aaKnown RBP20.22■□□□□ 0.83
TGFB3-206ENST00000556674 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
TGFB3-206ENST00000556674 DPF2Q92785 391 aa20.22■□□□□ 0.83
TGFB3-206ENST00000556674 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
TGFB3-206ENST00000556674 GNAI3P08754 354 aa20.21■□□□□ 0.83
TGFB3-206ENST00000556674 SOX10P56693 466 aa20.21■□□□□ 0.83
TGFB3-206ENST00000556674 NOGQ13253 232 aa20.21■□□□□ 0.83
TGFB3-206ENST00000556674 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
TGFB3-206ENST00000556674 ANKRD44Q8N8A2 993 aa20.21■□□□□ 0.83
TGFB3-206ENST00000556674 COA1Q9GZY4 146 aa20.21■□□□□ 0.83
TGFB3-206ENST00000556674 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
TGFB3-206ENST00000556674 ZC3H15Q8WU90 426 aaKnown RBP20.2■□□□□ 0.82
TGFB3-206ENST00000556674 MROH5Q6ZUA9 1318 aa20.2■□□□□ 0.82
TGFB3-206ENST00000556674 ZNF609O15014 1411 aa20.19■□□□□ 0.82
TGFB3-206ENST00000556674 HUNKP57058 714 aa20.19■□□□□ 0.82
TGFB3-206ENST00000556674 C15orf52Q6ZUT6 534 aaKnown RBP20.19■□□□□ 0.82
TGFB3-206ENST00000556674 TRPM4Q8TD43 1214 aa20.19■□□□□ 0.82
TGFB3-206ENST00000556674 H7C1D1 291 aa20.18■□□□□ 0.82
TGFB3-206ENST00000556674 PSMD14O00487 310 aa20.18■□□□□ 0.82
TGFB3-206ENST00000556674 DLK2Q6UY11 383 aa20.18■□□□□ 0.82
TGFB3-206ENST00000556674 ZNF594Q96JF6 807 aaPredicted RBP20.18■□□□□ 0.82
TGFB3-206ENST00000556674 A0A1B0GUL6 1792 aa20.17■□□□□ 0.82
TGFB3-206ENST00000556674 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
TGFB3-206ENST00000556674 VIL1P09327 827 aaKnown RBP20.17■□□□□ 0.82
TGFB3-206ENST00000556674 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
TGFB3-206ENST00000556674 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
TGFB3-206ENST00000556674 PSME4Q14997 1843 aa20.17■□□□□ 0.82
TGFB3-206ENST00000556674 USP17L3A6NCW0 530 aa20.16■□□□□ 0.82
TGFB3-206ENST00000556674 USP17L4A6NCW7 530 aa20.16■□□□□ 0.82
TGFB3-206ENST00000556674 UBE4AQ14139 1066 aa20.16■□□□□ 0.82
TGFB3-206ENST00000556674 USP17L1Q7RTZ2 530 aa20.16■□□□□ 0.82
TGFB3-206ENST00000556674 FTSJ3Q8IY81 847 aaKnown RBP20.16■□□□□ 0.82
TGFB3-206ENST00000556674 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
TGFB3-206ENST00000556674 CNOT7Q9UIV1 285 aaKnown RBP20.16■□□□□ 0.82
TGFB3-206ENST00000556674 FAM155AB1AL88 458 aaPredicted RBP20.15■□□□□ 0.82
TGFB3-206ENST00000556674 MS4A1P11836 297 aa20.15■□□□□ 0.82
TGFB3-206ENST00000556674 MMP14P50281 582 aa20.15■□□□□ 0.82
TGFB3-206ENST00000556674 MEIS3Q99687 375 aa20.15■□□□□ 0.82
TGFB3-206ENST00000556674 RIPOR2Q9Y4F9 1068 aa20.15■□□□□ 0.82
TGFB3-206ENST00000556674 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
TGFB3-206ENST00000556674 TAF5LO75529 589 aa20.14■□□□□ 0.81
TGFB3-206ENST00000556674 STRIP1Q5VSL9 837 aa20.14■□□□□ 0.81
TGFB3-206ENST00000556674 RGMBQ6NW40 437 aa20.14■□□□□ 0.81
TGFB3-206ENST00000556674 RSBN1LQ6PCB5 846 aaPredicted RBP20.14■□□□□ 0.81
TGFB3-206ENST00000556674 ZNF804AQ7Z570 1209 aa20.14■□□□□ 0.81
TGFB3-206ENST00000556674 CLUAP1Q96AJ1 413 aa20.14■□□□□ 0.81
TGFB3-206ENST00000556674 SAGE1Q9NXZ1 904 aa20.14■□□□□ 0.81
TGFB3-206ENST00000556674 LRRFIP2Q9Y608 721 aaKnown RBP20.14■□□□□ 0.81
TGFB3-206ENST00000556674 PRPF38BQ5VTL8 546 aaKnown RBP20.13■□□□□ 0.81
TGFB3-206ENST00000556674 MICALL2Q8IY33 904 aa20.13■□□□□ 0.81
TGFB3-206ENST00000556674 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
TGFB3-206ENST00000556674 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
TGFB3-206ENST00000556674 SCN9AQ15858 1988 aa20.13■□□□□ 0.81
TGFB3-206ENST00000556674 WTIPA6NIX2 430 aaPredicted RBP20.12■□□□□ 0.81
TGFB3-206ENST00000556674 PLIN1O60240 522 aa20.12■□□□□ 0.81
TGFB3-206ENST00000556674 KIF23Q02241 960 aaPredicted RBP20.12■□□□□ 0.81
TGFB3-206ENST00000556674 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
TGFB3-206ENST00000556674 TXNRD3Q86VQ6 643 aa20.12■□□□□ 0.81
TGFB3-206ENST00000556674 KCNQ5Q9NR82 932 aa20.12■□□□□ 0.81
TGFB3-206ENST00000556674 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
TGFB3-206ENST00000556674 IRS2Q9Y4H2 1338 aa20.11■□□□□ 0.81
TGFB3-206ENST00000556674 EYA2O00167 538 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms