RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 SCN4AP35499 1836 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 G3V3G9 751 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 EYA2O00167 538 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 ZBTB7BO15156 539 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-211ENST00000556636 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
GABRB3-211ENST00000556636 MTX1Q13505 466 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-211ENST00000556636 USP50Q70EL3 339 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-211ENST00000556636 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
GABRB3-211ENST00000556636 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 HDAC5Q9UQL6 1122 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 CEP350Q5VT06 3117 aa13.42□□□□□ -0.26
GABRB3-211ENST00000556636 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 EGFRP00533 1210 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 KCNJ4P48050 445 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 DACT2Q5SW24 774 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-211ENST00000556636 MXD3Q9BW11 206 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 RCAN3Q9UKA8 241 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
GABRB3-211ENST00000556636 PDE8BO95263 885 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 GNAI2P04899 355 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 IL1R1P14778 569 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 FGFR2P21802 821 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 STRIP1Q5VSL9 837 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
GABRB3-211ENST00000556636 TTLL5Q6EMB2 1281 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 SAMD7Q7Z3H4 446 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 DNAJC5GQ8N7S2 189 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 AGBL3Q8NEM8 1001 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 PANK1Q8TE04 598 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 COPRSQ9NQ92 184 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
GABRB3-211ENST00000556636 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
GABRB3-211ENST00000556636 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 H7C1D1 291 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 APLP1P51693 650 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 ZNF280AP59817 542 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-211ENST00000556636 HTRA3P83110 453 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 FBXO33Q7Z6M2 555 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 ZNF609O15014 1411 aa13.39□□□□□ -0.27
GABRB3-211ENST00000556636 ADAMTSL1Q8N6G6 1762 aa13.38□□□□□ -0.27
GABRB3-211ENST00000556636 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
GABRB3-211ENST00000556636 CIAO1O76071 339 aa13.38□□□□□ -0.27
GABRB3-211ENST00000556636 GYG1P46976 350 aa13.38□□□□□ -0.27
GABRB3-211ENST00000556636 GTF2IP78347 998 aa13.38□□□□□ -0.27
GABRB3-211ENST00000556636 FTSJ3Q8IY81 847 aaKnown RBP13.38□□□□□ -0.27
GABRB3-211ENST00000556636 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
GABRB3-211ENST00000556636 ZC3H15Q8WU90 426 aaKnown RBP13.38□□□□□ -0.27
GABRB3-211ENST00000556636 SIL1Q9H173 461 aa13.38□□□□□ -0.27
GABRB3-211ENST00000556636 SRGAP3O43295 1099 aa13.37□□□□□ -0.27
GABRB3-211ENST00000556636 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
GABRB3-211ENST00000556636 FMR1Q06787 632 aaKnown RBP eCLIP13.37□□□□□ -0.27
GABRB3-211ENST00000556636 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
GABRB3-211ENST00000556636 ZNF804AQ7Z570 1209 aa13.37□□□□□ -0.27
GABRB3-211ENST00000556636 CERS5Q8N5B7 392 aa13.37□□□□□ -0.27
GABRB3-211ENST00000556636 SASH1O94885 1247 aa13.36□□□□□ -0.27
GABRB3-211ENST00000556636 USP17L8P0C7I0 530 aa13.36□□□□□ -0.27
GABRB3-211ENST00000556636 IL15P40933 162 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-211ENST00000556636 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
GABRB3-211ENST00000556636 POLA2Q14181 598 aa13.36□□□□□ -0.27
GABRB3-211ENST00000556636 RBM26Q5T8P6 1007 aaKnown RBP13.36□□□□□ -0.27
GABRB3-211ENST00000556636 ITPRIPQ8IWB1 547 aa13.36□□□□□ -0.27
GABRB3-211ENST00000556636 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-211ENST00000556636 BCAMP50895 628 aa13.35□□□□□ -0.27
GABRB3-211ENST00000556636 PUM3Q15397 648 aaKnown RBP13.35□□□□□ -0.27
GABRB3-211ENST00000556636 LPIN2Q92539 896 aa13.35□□□□□ -0.27
GABRB3-211ENST00000556636 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
GABRB3-211ENST00000556636 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
GABRB3-211ENST00000556636 ASTN2O75129 1339 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-211ENST00000556636 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
GABRB3-211ENST00000556636 TRAF5O00463 557 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 MS4A1P11836 297 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
GABRB3-211ENST00000556636 KIF4BQ2VIQ3 1234 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 SSH3Q8TE77 659 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
GABRB3-211ENST00000556636 MYOZ2Q9NPC6 264 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
GABRB3-211ENST00000556636 A0A1B0GUL6 1792 aa13.33□□□□□ -0.28
GABRB3-211ENST00000556636 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.28
GABRB3-211ENST00000556636 SCARF1Q14162 830 aa13.33□□□□□ -0.28
GABRB3-211ENST00000556636 MVPQ14764 893 aaKnown RBP13.33□□□□□ -0.28
GABRB3-211ENST00000556636 CST9Q5W186 159 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms