RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
ACTN1-221ENST00000556571 BSDC1Q9NW68 430 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-221ENST00000556571 SCAF8Q9UPN6 1271 aaKnown RBP15.33■□□□□ 0.04
ACTN1-221ENST00000556571 MYO3BQ8WXR4 1341 aa15.33■□□□□ 0.04
ACTN1-221ENST00000556571 PAPPA2Q9BXP8 1791 aa15.33■□□□□ 0.04
ACTN1-221ENST00000556571 CTSWP56202 376 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 STRIP1Q5VSL9 837 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 CCDC30Q5VVM6 783 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 COA1Q9GZY4 146 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 MINPP1Q9UNW1 487 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 MED23Q9ULK4 1368 aa15.32■□□□□ 0.04
ACTN1-221ENST00000556571 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-221ENST00000556571 GPR25O00155 361 aa15.31■□□□□ 0.04
ACTN1-221ENST00000556571 WNT10BO00744 389 aa15.31■□□□□ 0.04
ACTN1-221ENST00000556571 CCT4P50991 539 aaKnown RBP15.31■□□□□ 0.04
ACTN1-221ENST00000556571 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
ACTN1-221ENST00000556571 TTLL11Q8NHH1 800 aa15.31■□□□□ 0.04
ACTN1-221ENST00000556571 MAP3K2Q9Y2U5 619 aa15.31■□□□□ 0.04
ACTN1-221ENST00000556571 SREBF2Q12772 1141 aa15.3■□□□□ 0.04
ACTN1-221ENST00000556571 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
ACTN1-221ENST00000556571 ARMC9Q7Z3E5 817 aa15.3■□□□□ 0.04
ACTN1-221ENST00000556571 C8orf58Q8NAV2 365 aa15.3■□□□□ 0.04
ACTN1-221ENST00000556571 MXD3Q9BW11 206 aa15.3■□□□□ 0.04
ACTN1-221ENST00000556571 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
ACTN1-221ENST00000556571 APAF1O14727 1248 aa15.29■□□□□ 0.04
ACTN1-221ENST00000556571 NEXNQ0ZGT2 675 aa15.29■□□□□ 0.04
ACTN1-221ENST00000556571 FBXO46Q6PJ61 603 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-221ENST00000556571 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
ACTN1-221ENST00000556571 CFHR5Q9BXR6 569 aa15.29■□□□□ 0.04
ACTN1-221ENST00000556571 GREM2Q9H772 168 aa15.29■□□□□ 0.04
ACTN1-221ENST00000556571 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
ACTN1-221ENST00000556571 IGKV5-2P06315 115 aa15.28■□□□□ 0.04
ACTN1-221ENST00000556571 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
ACTN1-221ENST00000556571 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
ACTN1-221ENST00000556571 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
ACTN1-221ENST00000556571 PSME4Q14997 1843 aa15.28■□□□□ 0.04
ACTN1-221ENST00000556571 FKTNO75072 461 aa15.27■□□□□ 0.04
ACTN1-221ENST00000556571 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
ACTN1-221ENST00000556571 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
ACTN1-221ENST00000556571 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
ACTN1-221ENST00000556571 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.04
ACTN1-221ENST00000556571 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.04
ACTN1-221ENST00000556571 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
ACTN1-221ENST00000556571 SASH1O94885 1247 aa15.26■□□□□ 0.03
ACTN1-221ENST00000556571 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
ACTN1-221ENST00000556571 TXNRD3Q86VQ6 643 aa15.26■□□□□ 0.03
ACTN1-221ENST00000556571 NEURL1BA8MQ27 555 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 H7C1W4 665 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 INHBEP58166 350 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 PRKG1Q13976 671 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 SPRYD7Q5W111 196 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 ZBED3Q96IU2 234 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-221ENST00000556571 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
ACTN1-221ENST00000556571 ANGEL1Q9UNK9 670 aaKnown RBP15.25■□□□□ 0.03
ACTN1-221ENST00000556571 GTF2IP78347 998 aa15.24■□□□□ 0.03
ACTN1-221ENST00000556571 CWF19L2Q2TBE0 894 aaKnown RBP15.24■□□□□ 0.03
ACTN1-221ENST00000556571 UBE3BQ7Z3V4 1068 aa15.24■□□□□ 0.03
ACTN1-221ENST00000556571 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
ACTN1-221ENST00000556571 MPHOSPH8Q99549 860 aa15.24■□□□□ 0.03
ACTN1-221ENST00000556571 PLA2G12BQ9BX93 195 aa15.24■□□□□ 0.03
ACTN1-221ENST00000556571 R3HDMLQ9H3Y0 253 aa15.24■□□□□ 0.03
ACTN1-221ENST00000556571 MANSC4A6NHS7 340 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-221ENST00000556571 ITGA6P23229 1130 aa15.23■□□□□ 0.03
ACTN1-221ENST00000556571 SLC10A4Q96EP9 437 aa15.23■□□□□ 0.03
ACTN1-221ENST00000556571 DEFB129Q9H1M3 183 aa15.23■□□□□ 0.03
ACTN1-221ENST00000556571 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-221ENST00000556571 KLRK1P26718 216 aa15.22■□□□□ 0.03
ACTN1-221ENST00000556571 KCNJ4P48050 445 aa15.22■□□□□ 0.03
ACTN1-221ENST00000556571 DLGAP5Q15398 846 aa15.22■□□□□ 0.03
ACTN1-221ENST00000556571 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
ACTN1-221ENST00000556571 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-221ENST00000556571 CD209Q9NNX6 404 aa15.22■□□□□ 0.03
ACTN1-221ENST00000556571 PPP2R3BQ9Y5P8 575 aa15.22■□□□□ 0.03
ACTN1-221ENST00000556571 UNCXA6NJT0 531 aa15.21■□□□□ 0.03
ACTN1-221ENST00000556571 CSF1RP07333 972 aa15.21■□□□□ 0.03
ACTN1-221ENST00000556571 ZBTB48P10074 688 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-221ENST00000556571 GCKRQ14397 625 aa15.21■□□□□ 0.03
ACTN1-221ENST00000556571 IFNL1Q8IU54 200 aa15.21■□□□□ 0.03
ACTN1-221ENST00000556571 MTMR14Q8NCE2 650 aa15.21■□□□□ 0.03
ACTN1-221ENST00000556571 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
ACTN1-221ENST00000556571 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-221ENST00000556571 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
ACTN1-221ENST00000556571 CHRNDQ07001 517 aa15.2■□□□□ 0.02
ACTN1-221ENST00000556571 SUPT20HL1Q3ZLR7 823 aa15.2■□□□□ 0.02
ACTN1-221ENST00000556571 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
ACTN1-221ENST00000556571 TRIM17Q9Y577 477 aa15.2■□□□□ 0.02
ACTN1-221ENST00000556571 MYO1BO43795 1136 aa15.19■□□□□ 0.02
ACTN1-221ENST00000556571 C15orf52Q6ZUT6 534 aaKnown RBP15.19■□□□□ 0.02
ACTN1-221ENST00000556571 G2E3Q7L622 706 aa15.19■□□□□ 0.02
ACTN1-221ENST00000556571 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
ACTN1-221ENST00000556571 WNK4Q96J92 1243 aa15.19■□□□□ 0.02
ACTN1-221ENST00000556571 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
ACTN1-221ENST00000556571 FZD1Q9UP38 647 aa15.19■□□□□ 0.02
ACTN1-221ENST00000556571 ANKRD18BA2A2Z9 1011 aa15.18■□□□□ 0.02
ACTN1-221ENST00000556571 CASP7P55210 303 aa15.18■□□□□ 0.02
ACTN1-221ENST00000556571 TWISTNBQ3B726 338 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-221ENST00000556571 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
ACTN1-221ENST00000556571 OTOP1Q7RTM1 612 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms