RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ZDHHC9Q9Y397 364 aa21.9■■□□□ 1.1
SDR39U1-220ENST00000556548 U3KPZ7 1027 aaPredicted RBP21.9■■□□□ 1.1
SDR39U1-220ENST00000556548 CYP2E1P05181 493 aaPredicted RBP21.89■■□□□ 1.1
SDR39U1-220ENST00000556548 CYP21A2P08686 494 aa21.89■■□□□ 1.1
SDR39U1-220ENST00000556548 PSMA5P28066 241 aa21.89■■□□□ 1.1
SDR39U1-220ENST00000556548 BLOC1S2Q6QNY1 142 aa21.89■■□□□ 1.1
SDR39U1-220ENST00000556548 RPAP1Q9BWH6 1393 aaPredicted RBP21.89■■□□□ 1.09
SDR39U1-220ENST00000556548 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
SDR39U1-220ENST00000556548 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.09
SDR39U1-220ENST00000556548 INTS4Q96HW7 963 aaKnown RBP21.89■■□□□ 1.09
SDR39U1-220ENST00000556548 BCL11BQ9C0K0 894 aaPredicted RBP21.89■■□□□ 1.09
SDR39U1-220ENST00000556548 COL4A1P02462 1669 aa21.89■■□□□ 1.09
SDR39U1-220ENST00000556548 ABCC12Q96J65 1359 aa21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 SLC5A1P13866 664 aa21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 CHRNDQ07001 517 aa21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 HMG20BQ9P0W2 317 aa21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 DDX11L8A8MPP1 907 aa21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 HSPD1P10809 573 aaKnown RBP21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 CHAMP1Q96JM3 812 aa21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 GZF1Q9H116 711 aaPredicted RBP21.88■■□□□ 1.09
SDR39U1-220ENST00000556548 WTIPA6NIX2 430 aaPredicted RBP21.87■■□□□ 1.09
SDR39U1-220ENST00000556548 TRAK2O60296 914 aa21.87■■□□□ 1.09
SDR39U1-220ENST00000556548 BAG4O95429 457 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-220ENST00000556548 RFC4P35249 363 aa21.87■■□□□ 1.09
SDR39U1-220ENST00000556548 PIH1D3Q9NQM4 214 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-220ENST00000556548 LRP5O75197 1615 aa21.87■■□□□ 1.09
SDR39U1-220ENST00000556548 TRIM37O94972 964 aa21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 TRAPPC3LQ5T215 181 aa21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 PUS7LQ9H0K6 701 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 IDH1O75874 414 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 RPS6KB1P23443 525 aa21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 CCDC83Q8IWF9 413 aa21.86■■□□□ 1.09
SDR39U1-220ENST00000556548 BCAMP50895 628 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 LRRFIP1Q32MZ4 808 aaKnown RBP21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 TPCN1Q9ULQ1 816 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 RTL9Q8NET4 1388 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 SPEF2Q9C093 1822 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 NPHP1O15259 732 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 TSGA10IPQ3SY00 556 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 KRT27Q7Z3Y8 459 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 NECAB1Q8N987 351 aa21.85■■□□□ 1.09
SDR39U1-220ENST00000556548 ARID4AP29374 1257 aaPredicted RBP21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 SF3B3Q15393 1217 aaKnown RBP21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 ME3Q16798 604 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 SLC9C2Q5TAH2 1124 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 MCTP1Q6DN14 999 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 TTLL5Q6EMB2 1281 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 ZNF512BQ96KM6 892 aaPredicted RBP21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 NEK1Q96PY6 1258 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 DSCC1Q9BVC3 393 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 ZFYP08048 801 aaPredicted RBP21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 UQCRFS1P1P0C7P4 283 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 STOX1Q6ZVD7 989 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 NYXQ9GZU5 481 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 SCN7AQ01118 1682 aa21.84■■□□□ 1.09
SDR39U1-220ENST00000556548 RASGRF1Q13972 1273 aa21.83■■□□□ 1.09
SDR39U1-220ENST00000556548 APPBP2Q92624 585 aa21.83■■□□□ 1.09
SDR39U1-220ENST00000556548 KRT32Q14532 448 aa21.83■■□□□ 1.08
SDR39U1-220ENST00000556548 SPATA5Q8NB90 893 aa21.83■■□□□ 1.08
SDR39U1-220ENST00000556548 LRRC2Q9BYS8 371 aa21.83■■□□□ 1.08
SDR39U1-220ENST00000556548 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.83■■□□□ 1.08
SDR39U1-220ENST00000556548 IQSEC3Q9UPP2 1182 aaPredicted RBP21.83■■□□□ 1.08
SDR39U1-220ENST00000556548 TAF1P21675 1872 aa21.82■■□□□ 1.08
SDR39U1-220ENST00000556548 SLC10A5Q5PT55 438 aa21.82■■□□□ 1.08
SDR39U1-220ENST00000556548 TPTE2Q6XPS3 522 aa21.82■■□□□ 1.08
SDR39U1-220ENST00000556548 TICAM2Q86XR7 235 aa21.82■■□□□ 1.08
SDR39U1-220ENST00000556548 NLRP3Q96P20 1036 aa21.82■■□□□ 1.08
SDR39U1-220ENST00000556548 LY75O60449 1722 aa21.82■■□□□ 1.08
SDR39U1-220ENST00000556548 TOB2Q14106 344 aaPredicted RBP21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 TTF1Q15361 905 aaPredicted RBP21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 FOXD4L6Q3SYB3 417 aaPredicted RBP21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 FOXD4L3Q6VB84 417 aaPredicted RBP21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 WWC3Q9ULE0 1092 aa21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 AKAP11Q9UKA4 1901 aa21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 LAMB2P55268 1798 aa21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.81■■□□□ 1.08
SDR39U1-220ENST00000556548 FOXP2O15409 715 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 GPAA1O43292 621 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 ADD2P35612 726 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 ST3GAL1Q11201 340 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 STK3Q13188 491 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 ZSCAN31Q96LW9 406 aaPredicted RBP21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 SMC3Q9UQE7 1217 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 TAF1LQ8IZX4 1826 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 ZNF532Q9HCE3 1301 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 BRD1O95696 1058 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 HAND2P61296 217 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 CLEC17AQ6ZS10 378 aa21.8■■□□□ 1.08
SDR39U1-220ENST00000556548 RGL2O15211 777 aa21.79■■□□□ 1.08
SDR39U1-220ENST00000556548 BSDC1Q9NW68 430 aaPredicted RBP21.79■■□□□ 1.08
SDR39U1-220ENST00000556548 MINPP1Q9UNW1 487 aa21.79■■□□□ 1.08
SDR39U1-220ENST00000556548 GOLGA6L22H0YM25 854 aa21.79■■□□□ 1.08
SDR39U1-220ENST00000556548 GYG1P46976 350 aa21.79■■□□□ 1.08
SDR39U1-220ENST00000556548 Q6ZUG5 572 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms