RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 CCT4P50991 539 aaKnown RBP12.54□□□□□ -0.4
CRX-203ENST00000556527 SOX10P56693 466 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 COA1Q9GZY4 146 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 GREM2Q9H772 168 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
CRX-203ENST00000556527 UBE2Q2LH0YL09 131 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 MMP14P50281 582 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 CWF19L2Q2TBE0 894 aaKnown RBP12.53□□□□□ -0.4
CRX-203ENST00000556527 NBPF9Q3BBW0 867 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 STRIP1Q5VSL9 837 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
CRX-203ENST00000556527 GMLQ99445 158 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 MYH16Q9H6N6 1097 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
CRX-203ENST00000556527 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
CRX-203ENST00000556527 SCN9AQ15858 1988 aa12.52□□□□□ -0.4
CRX-203ENST00000556527 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 IGKV5-2P06315 115 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 PKN2Q16513 984 aaKnown RBP12.52□□□□□ -0.41
CRX-203ENST00000556527 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
CRX-203ENST00000556527 DACT2Q5SW24 774 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 ARMC9Q7Z3E5 817 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 TSPYL6Q8N831 410 aa12.52□□□□□ -0.41
CRX-203ENST00000556527 WNT10BO00744 389 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 SASH1O94885 1247 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 ITGA6P23229 1130 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
CRX-203ENST00000556527 MOB2Q70IA6 237 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 APOBEC3FQ8IUX4 373 aaKnown RBP12.51□□□□□ -0.41
CRX-203ENST00000556527 KIAA0825Q8IV33 1275 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 ZNF804BA4D1E1 1349 aa12.51□□□□□ -0.41
CRX-203ENST00000556527 POLR2AP24928 1970 aaKnown RBP12.5□□□□□ -0.41
CRX-203ENST00000556527 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
CRX-203ENST00000556527 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
CRX-203ENST00000556527 PRKG1Q13976 671 aa12.5□□□□□ -0.41
CRX-203ENST00000556527 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
CRX-203ENST00000556527 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
CRX-203ENST00000556527 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
CRX-203ENST00000556527 MYO1BO43795 1136 aa12.49□□□□□ -0.41
CRX-203ENST00000556527 GTF2IP78347 998 aa12.49□□□□□ -0.41
CRX-203ENST00000556527 GCKRQ14397 625 aa12.49□□□□□ -0.41
CRX-203ENST00000556527 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
CRX-203ENST00000556527 ZNF296Q8WUU4 475 aaPredicted RBP12.49□□□□□ -0.41
CRX-203ENST00000556527 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
CRX-203ENST00000556527 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
CRX-203ENST00000556527 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
CRX-203ENST00000556527 H7C1W4 665 aa12.48□□□□□ -0.41
CRX-203ENST00000556527 FLIIQ13045 1269 aa12.48□□□□□ -0.41
CRX-203ENST00000556527 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
CRX-203ENST00000556527 PSME4Q14997 1843 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 GPR25O00155 361 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 PPP1R12BO60237 982 aaPredicted RBP12.47□□□□□ -0.41
CRX-203ENST00000556527 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 TM4SF4P48230 202 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 CHRNDQ07001 517 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
CRX-203ENST00000556527 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 G2E3Q7L622 706 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 ZNF804AQ7Z570 1209 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 DNAAF4Q8WXU2 420 aa12.47□□□□□ -0.41
CRX-203ENST00000556527 SPEF2Q9C093 1822 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 FKTNO75072 461 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 KLRK1P26718 216 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
CRX-203ENST00000556527 PTPN12Q05209 780 aaKnown RBP12.46□□□□□ -0.41
CRX-203ENST00000556527 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 PLA2G12BQ9BX93 195 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 DEFB129Q9H1M3 183 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
CRX-203ENST00000556527 MYH3P11055 1940 aa12.45□□□□□ -0.42
CRX-203ENST00000556527 IL16Q14005 1332 aa12.45□□□□□ -0.42
CRX-203ENST00000556527 MANSC4A6NHS7 340 aaPredicted RBP12.45□□□□□ -0.42
CRX-203ENST00000556527 F8W031 263 aaPredicted RBP12.45□□□□□ -0.42
CRX-203ENST00000556527 INHBEP58166 350 aa12.45□□□□□ -0.42
CRX-203ENST00000556527 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
CRX-203ENST00000556527 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
CRX-203ENST00000556527 FBXO46Q6PJ61 603 aaPredicted RBP12.45□□□□□ -0.42
CRX-203ENST00000556527 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
CRX-203ENST00000556527 PPP2R3BQ9Y5P8 575 aa12.45□□□□□ -0.42
CRX-203ENST00000556527 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
CRX-203ENST00000556527 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
CRX-203ENST00000556527 TAF5LO75529 589 aa12.44□□□□□ -0.42
CRX-203ENST00000556527 CSF1RP07333 972 aa12.44□□□□□ -0.42
CRX-203ENST00000556527 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
CRX-203ENST00000556527 PRPF38BQ5VTL8 546 aaKnown RBP12.44□□□□□ -0.42
CRX-203ENST00000556527 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
CRX-203ENST00000556527 OTUD7BQ6GQQ9 843 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms