RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 PSMD2Q13200 908 aa7.81□□□□□ -1.16
PCNX1-212ENST00000556516 GLIS3Q8NEA6 775 aa7.81□□□□□ -1.16
PCNX1-212ENST00000556516 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
PCNX1-212ENST00000556516 FBF1Q8TES7 1133 aa7.81□□□□□ -1.16
PCNX1-212ENST00000556516 MRRFQ96E11 262 aaKnown RBP7.81□□□□□ -1.16
PCNX1-212ENST00000556516 POP1Q99575 1024 aaKnown RBP7.81□□□□□ -1.16
PCNX1-212ENST00000556516 PBX4Q9BYU1 374 aa7.81□□□□□ -1.16
PCNX1-212ENST00000556516 KIAA1522Q9P206 1035 aaPredicted RBP7.81□□□□□ -1.16
PCNX1-212ENST00000556516 M0R082 166 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 CDC25BP30305 580 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 GNA15P30679 374 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 GRIA4P48058 902 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 SPRED3Q2MJR0 410 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 ZNF417Q8TAU3 575 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 BTBD6Q96KE9 485 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 ZNF587Q96SQ5 575 aaPredicted RBP7.8□□□□□ -1.16
PCNX1-212ENST00000556516 TCF12Q99081 682 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 SUV39H2Q9H5I1 410 aa7.8□□□□□ -1.16
PCNX1-212ENST00000556516 PDE2AO00408 941 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-212ENST00000556516 RGS9O75916 674 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-212ENST00000556516 FCGRTP55899 365 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 DAB2P98082 770 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 PCSK7Q16549 785 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 KIAA0319Q5VV43 1072 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 RBSNQ9H1K0 784 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 SH2B1Q9NRF2 756 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-212ENST00000556516 VTI1BQ9UEU0 232 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 SPG7Q9UQ90 795 aa7.79□□□□□ -1.16
PCNX1-212ENST00000556516 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
PCNX1-212ENST00000556516 C20orf204Q6ZNR8 217 aa7.78□□□□□ -1.16
PCNX1-212ENST00000556516 TMC4Q7Z404 712 aa7.78□□□□□ -1.16
PCNX1-212ENST00000556516 NPM2Q86SE8 214 aaKnown RBP7.78□□□□□ -1.16
PCNX1-212ENST00000556516 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
PCNX1-212ENST00000556516 RRAGCQ9HB90 399 aa7.78□□□□□ -1.16
PCNX1-212ENST00000556516 MRS2Q9HD23 443 aa7.78□□□□□ -1.16
PCNX1-212ENST00000556516 ABCB6Q9NP58 842 aa7.78□□□□□ -1.16
PCNX1-212ENST00000556516 SMNDC1O75940 238 aaKnown RBP eCLIP7.77□□□□□ -1.17
PCNX1-212ENST00000556516 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 MAP3K10Q02779 954 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 GRIK5Q16478 980 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 TXNDC11Q6PKC3 985 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 CCNJLQ8IV13 435 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 TMEM102Q8N9M5 508 aaPredicted RBP7.77□□□□□ -1.17
PCNX1-212ENST00000556516 NEDD1Q8NHV4 660 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 MUC3BQ9H195 1237 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
PCNX1-212ENST00000556516 SORBS3O60504 671 aa7.76□□□□□ -1.17
PCNX1-212ENST00000556516 FBXO24O75426 580 aa7.76□□□□□ -1.17
PCNX1-212ENST00000556516 CTSHP09668 335 aa7.76□□□□□ -1.17
PCNX1-212ENST00000556516 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
PCNX1-212ENST00000556516 EIF4BP23588 611 aaKnown RBP7.76□□□□□ -1.17
PCNX1-212ENST00000556516 AFF1P51825 1210 aaKnown RBP7.76□□□□□ -1.17
PCNX1-212ENST00000556516 MRPL58Q14197 206 aaKnown RBP7.76□□□□□ -1.17
PCNX1-212ENST00000556516 TSNAXIP1Q2TAA8 658 aa7.76□□□□□ -1.17
PCNX1-212ENST00000556516 AK5Q9Y6K8 562 aa7.76□□□□□ -1.17
PCNX1-212ENST00000556516 WIPF1O43516 503 aa7.75□□□□□ -1.17
PCNX1-212ENST00000556516 EPHA1P21709 976 aa7.75□□□□□ -1.17
PCNX1-212ENST00000556516 SNRPNP63162 240 aaKnown RBP7.75□□□□□ -1.17
PCNX1-212ENST00000556516 MEI1Q5TIA1 1274 aa7.75□□□□□ -1.17
PCNX1-212ENST00000556516 BHLHE41Q9C0J9 482 aaPredicted RBP7.75□□□□□ -1.17
PCNX1-212ENST00000556516 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
PCNX1-212ENST00000556516 AKAP2Q9Y2D5 859 aa7.75□□□□□ -1.17
PCNX1-212ENST00000556516 A0A096LPE4 126 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 A0A1W2PPZ6 126 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 LILRB5O75023 590 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 RECKO95980 971 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 DGKGP49619 791 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 ZNF157P51786 506 aaPredicted RBP7.74□□□□□ -1.17
PCNX1-212ENST00000556516 HGSNATQ68CP4 663 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 DTHD1Q6ZMT9 781 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 C3orf58Q8NDZ4 430 aa7.74□□□□□ -1.17
PCNX1-212ENST00000556516 ARHGEF15O94989 841 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 PTPRAP18433 802 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 BAG6P46379 1132 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 FGD1P98174 961 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 COL9A3Q14050 684 aaPredicted RBP7.73□□□□□ -1.17
PCNX1-212ENST00000556516 LDLRAD1Q5T700 205 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 PRPF40BQ6NWY9 871 aaKnown RBP7.73□□□□□ -1.17
PCNX1-212ENST00000556516 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 ZSCAN1Q8NBB4 408 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 TRAK1Q9UPV9 953 aa7.73□□□□□ -1.17
PCNX1-212ENST00000556516 KANK3Q6NY19 840 aa7.72□□□□□ -1.17
PCNX1-212ENST00000556516 VN1R5Q7Z5H4 357 aa7.72□□□□□ -1.17
PCNX1-212ENST00000556516 DMRTC2Q8IXT2 367 aaPredicted RBP7.72□□□□□ -1.17
PCNX1-212ENST00000556516 SOX13Q9UN79 622 aa7.72□□□□□ -1.17
PCNX1-212ENST00000556516 LINC01387J3KSC0 135 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 NID1P14543 1247 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 CDC27P30260 824 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 FAAP100Q0VG06 881 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 TPTE2Q6XPS3 522 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 CARD10Q9BWT7 1032 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 ZNF576Q9H609 170 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 FAM8A1Q9UBU6 413 aa7.71□□□□□ -1.18
PCNX1-212ENST00000556516 TTF2Q9UNY4 1162 aaKnown RBP7.71□□□□□ -1.18
PCNX1-212ENST00000556516 F6X3S4 739 aa7.7□□□□□ -1.18
PCNX1-212ENST00000556516 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms