RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 H7C1D1 291 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 RPS12P25398 132 aaKnown RBP10.21□□□□□ -0.77
VTI1B-206ENST00000556461 KCNJ4P48050 445 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 LRRC24Q50LG9 513 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 DACT2Q5SW24 774 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
VTI1B-206ENST00000556461 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 GLIS2Q9BZE0 524 aaPredicted RBP10.21□□□□□ -0.77
VTI1B-206ENST00000556461 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.77
VTI1B-206ENST00000556461 CNNM1Q9NRU3 951 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 CREBZFQ9NS37 354 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 PGAP2Q9UHJ9 254 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 RIPOR2Q9Y4F9 1068 aa10.21□□□□□ -0.77
VTI1B-206ENST00000556461 ASTN2O75129 1339 aaPredicted RBP10.21□□□□□ -0.78
VTI1B-206ENST00000556461 A0A1B0GUL6 1792 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
VTI1B-206ENST00000556461 ZBED9Q6R2W3 1325 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 MEIS3Q99687 375 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 COA1Q9GZY4 146 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 CD209Q9NNX6 404 aa10.2□□□□□ -0.78
VTI1B-206ENST00000556461 MKRN1Q9UHC7 482 aaKnown RBP10.2□□□□□ -0.78
VTI1B-206ENST00000556461 KIF16BQ96L93 1317 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 TMEM88BA6NKF7 163 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 TRIM27P14373 513 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 ZNF280AP59817 542 aaPredicted RBP10.19□□□□□ -0.78
VTI1B-206ENST00000556461 CST9Q5W186 159 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
VTI1B-206ENST00000556461 C15orf52Q6ZUT6 534 aaKnown RBP10.19□□□□□ -0.78
VTI1B-206ENST00000556461 JMYQ8N9B5 988 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 ARHGAP45Q92619 1136 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 FRAT1Q92837 279 aaPredicted RBP10.19□□□□□ -0.78
VTI1B-206ENST00000556461 JAG2Q9Y219 1238 aa10.19□□□□□ -0.78
VTI1B-206ENST00000556461 LRRFIP2Q9Y608 721 aaKnown RBP10.19□□□□□ -0.78
VTI1B-206ENST00000556461 ZNF646O15015 1829 aaPredicted RBP10.19□□□□□ -0.78
VTI1B-206ENST00000556461 ZNF609O15014 1411 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 UBTFL1P0CB47 393 aaPredicted RBP10.18□□□□□ -0.78
VTI1B-206ENST00000556461 GTF2IP78347 998 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
VTI1B-206ENST00000556461 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 STRIP1Q5VSL9 837 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 TTLL5Q6EMB2 1281 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 ATF7IPQ6VMQ6 1270 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 USP48Q86UV5 1035 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 VGLL2Q8N8G2 317 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 ZC3H15Q8WU90 426 aaKnown RBP10.18□□□□□ -0.78
VTI1B-206ENST00000556461 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
VTI1B-206ENST00000556461 CNTNAP1P78357 1384 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 PSME4Q14997 1843 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 ADM5C9JUS6 153 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 USP17L8P0C7I0 530 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 IL1R1P14778 569 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 GYG1P46976 350 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 SCARF1Q14162 830 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 METTL24Q5JXM2 366 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 MYOZ2Q9NPC6 264 aa10.17□□□□□ -0.78
VTI1B-206ENST00000556461 SCAF8Q9UPN6 1271 aaKnown RBP10.17□□□□□ -0.78
VTI1B-206ENST00000556461 MROH5Q6ZUA9 1318 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 CELF2O95319 508 aaKnown RBP10.16□□□□□ -0.78
VTI1B-206ENST00000556461 VEGFBP49765 207 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 UBE4AQ14139 1066 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 CDC37L1Q7L3B6 337 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 ATG9AQ7Z3C6 839 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 KIAA0825Q8IV33 1275 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 TMEM57Q8N5G2 664 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 FAM84BQ96KN1 310 aaPredicted RBP10.16□□□□□ -0.78
VTI1B-206ENST00000556461 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 PA2G4Q9UQ80 394 aaKnown RBP10.16□□□□□ -0.78
VTI1B-206ENST00000556461 PCDHAC2Q9Y5I4 1007 aa10.16□□□□□ -0.78
VTI1B-206ENST00000556461 RASSF10A6NK89 507 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 EYA2O00167 538 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 IPO8O15397 1037 aaKnown RBP10.15□□□□□ -0.78
VTI1B-206ENST00000556461 SASH1O94885 1247 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 RLBP1P12271 317 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 FGFR2P21802 821 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 NBPF9Q3BBW0 867 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 ANGEL2Q5VTE6 544 aaKnown RBP10.15□□□□□ -0.78
VTI1B-206ENST00000556461 ZKSCAN2Q63HK3 967 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 ZNF804AQ7Z570 1209 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 FBXO33Q7Z6M2 555 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 TDRD7Q8NHU6 1098 aaKnown RBP10.15□□□□□ -0.78
VTI1B-206ENST00000556461 SIL1Q9H173 461 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
VTI1B-206ENST00000556461 ABT1Q9ULW3 272 aaKnown RBP10.15□□□□□ -0.78
VTI1B-206ENST00000556461 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
VTI1B-206ENST00000556461 AOX1Q06278 1338 aa10.14□□□□□ -0.79
VTI1B-206ENST00000556461 F8W031 263 aaPredicted RBP10.14□□□□□ -0.79
VTI1B-206ENST00000556461 PDE8BO95263 885 aa10.14□□□□□ -0.79
VTI1B-206ENST00000556461 HIBADHP31937 336 aaKnown RBP10.14□□□□□ -0.79
VTI1B-206ENST00000556461 ZBED3Q96IU2 234 aaPredicted RBP10.14□□□□□ -0.79
VTI1B-206ENST00000556461 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
VTI1B-206ENST00000556461 MYO3BQ8WXR4 1341 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 WNT10BO00744 389 aa10.13□□□□□ -0.79
VTI1B-206ENST00000556461 GNAI3P08754 354 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms