RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.94□□□□□ -0.82
PRPF39-209ENST00000556353 ICMTO60725 284 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 PHACTR2O75167 634 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 TNFRSF21O75509 655 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 NOS3P29474 1203 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 SERPINB4P48594 390 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 FAM117BQ6P1L5 589 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 TP53INP1Q96A56 240 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 POP1Q99575 1024 aaKnown RBP9.93□□□□□ -0.82
PRPF39-209ENST00000556353 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
PRPF39-209ENST00000556353 CCDC87Q9NVE4 849 aa9.93□□□□□ -0.82
PRPF39-209ENST00000556353 H3BRB1 525 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 H2AFB1P0C5Y9 115 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 H2AFB2P0C5Z0 115 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 CDC25BP30305 580 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 TXNDC11Q6PKC3 985 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 GLYCTKQ8IVS8 523 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 TUT1Q9H6E5 874 aaKnown RBP9.92□□□□□ -0.82
PRPF39-209ENST00000556353 AKTIPQ9H8T0 292 aa9.92□□□□□ -0.82
PRPF39-209ENST00000556353 ACPPP15309 386 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 ITGB7P26010 798 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 ADAMTSL4Q6UY14 1074 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 GJD3Q8N144 294 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 TMEM130Q8N3G9 435 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 ADAM19Q9H013 955 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 SH2B1Q9NRF2 756 aaPredicted RBP9.91□□□□□ -0.82
PRPF39-209ENST00000556353 DZANK1Q9NVP4 752 aa9.91□□□□□ -0.82
PRPF39-209ENST00000556353 EREGO14944 169 aa9.9□□□□□ -0.82
PRPF39-209ENST00000556353 EPHA1P21709 976 aa9.9□□□□□ -0.82
PRPF39-209ENST00000556353 CABP4P57796 275 aa9.9□□□□□ -0.82
PRPF39-209ENST00000556353 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
PRPF39-209ENST00000556353 FOXD3Q9UJU5 478 aaPredicted RBP9.9□□□□□ -0.82
PRPF39-209ENST00000556353 F8W735 103 aaPredicted RBP9.89□□□□□ -0.83
PRPF39-209ENST00000556353 NFKBIEO00221 500 aa9.89□□□□□ -0.83
PRPF39-209ENST00000556353 PDE2AO00408 941 aaPredicted RBP9.89□□□□□ -0.83
PRPF39-209ENST00000556353 FSCN2O14926 492 aa9.89□□□□□ -0.83
PRPF39-209ENST00000556353 EDN3P14138 238 aa9.89□□□□□ -0.83
PRPF39-209ENST00000556353 CD68P34810 354 aaPredicted RBP9.89□□□□□ -0.83
PRPF39-209ENST00000556353 MEGF10Q96KG7 1140 aa9.89□□□□□ -0.83
PRPF39-209ENST00000556353 BRPF3Q9ULD4 1205 aa9.89□□□□□ -0.83
PRPF39-209ENST00000556353 TRPA1O75762 1119 aa9.88□□□□□ -0.83
PRPF39-209ENST00000556353 ALX3O95076 343 aa9.88□□□□□ -0.83
PRPF39-209ENST00000556353 KLHL23Q8NBE8 558 aa9.88□□□□□ -0.83
PRPF39-209ENST00000556353 CARD10Q9BWT7 1032 aa9.88□□□□□ -0.83
PRPF39-209ENST00000556353 H3BRJ5 948 aa9.87□□□□□ -0.83
PRPF39-209ENST00000556353 TMEM102Q8N9M5 508 aaPredicted RBP9.87□□□□□ -0.83
PRPF39-209ENST00000556353 HHIPQ96QV1 700 aa9.87□□□□□ -0.83
PRPF39-209ENST00000556353 OSMRQ99650 979 aa9.87□□□□□ -0.83
PRPF39-209ENST00000556353 SEC31BQ9NQW1 1179 aa9.87□□□□□ -0.83
PRPF39-209ENST00000556353 AMOTL2Q9Y2J4 779 aa9.87□□□□□ -0.83
PRPF39-209ENST00000556353 FOXD4L6Q3SYB3 417 aaPredicted RBP9.86□□□□□ -0.83
PRPF39-209ENST00000556353 PRSS36Q5K4E3 855 aa9.86□□□□□ -0.83
PRPF39-209ENST00000556353 FOXD4L3Q6VB84 417 aaPredicted RBP9.86□□□□□ -0.83
PRPF39-209ENST00000556353 TXNDC2Q86VQ3 553 aa9.86□□□□□ -0.83
PRPF39-209ENST00000556353 ZKSCAN3Q9BRR0 538 aa9.86□□□□□ -0.83
PRPF39-209ENST00000556353 NDUFB5O43674 189 aa9.85□□□□□ -0.83
PRPF39-209ENST00000556353 PIP4K2BP78356 416 aa9.85□□□□□ -0.83
PRPF39-209ENST00000556353 ECM1Q16610 540 aa9.85□□□□□ -0.83
PRPF39-209ENST00000556353 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.85□□□□□ -0.83
PRPF39-209ENST00000556353 DZIP1LQ8IYY4 767 aaKnown RBP9.85□□□□□ -0.83
PRPF39-209ENST00000556353 AGGF1Q8N302 714 aaeCLIP9.85□□□□□ -0.83
PRPF39-209ENST00000556353 WNT8BQ93098 351 aa9.85□□□□□ -0.83
PRPF39-209ENST00000556353 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
PRPF39-209ENST00000556353 GLB1P16278 677 aa9.84□□□□□ -0.83
PRPF39-209ENST00000556353 ARHGAP4P98171 946 aa9.84□□□□□ -0.83
PRPF39-209ENST00000556353 ZMYM1Q5SVZ6 1142 aa9.84□□□□□ -0.83
PRPF39-209ENST00000556353 CCER1Q8TC90 406 aaPredicted RBP9.84□□□□□ -0.83
PRPF39-209ENST00000556353 NXPE3Q969Y0 559 aa9.84□□□□□ -0.83
PRPF39-209ENST00000556353 KCNK4Q9NYG8 393 aa9.84□□□□□ -0.83
PRPF39-209ENST00000556353 TM4SF5O14894 197 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 DUOXA2Q1HG44 320 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 Q6ZS46 218 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 ACAD11Q709F0 780 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 BSNDQ8WZ55 320 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 KLHDC7BQ96G42 594 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 SOX13Q9UN79 622 aa9.83□□□□□ -0.84
PRPF39-209ENST00000556353 WISP1O95388 367 aa9.82□□□□□ -0.84
PRPF39-209ENST00000556353 ARL4DP49703 201 aa9.82□□□□□ -0.84
PRPF39-209ENST00000556353 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
PRPF39-209ENST00000556353 SLC7A3Q8WY07 619 aa9.82□□□□□ -0.84
PRPF39-209ENST00000556353 LATS2Q9NRM7 1088 aa9.82□□□□□ -0.84
PRPF39-209ENST00000556353 NEFLP07196 543 aa9.81□□□□□ -0.84
PRPF39-209ENST00000556353 PEAR1Q5VY43 1037 aaPredicted RBP9.81□□□□□ -0.84
PRPF39-209ENST00000556353 ASAP3Q8TDY4 903 aa9.81□□□□□ -0.84
PRPF39-209ENST00000556353 BHLHE41Q9C0J9 482 aaPredicted RBP9.81□□□□□ -0.84
PRPF39-209ENST00000556353 DDX3YO15523 660 aaKnown RBP9.8□□□□□ -0.84
PRPF39-209ENST00000556353 ADAM11O75078 769 aa9.8□□□□□ -0.84
PRPF39-209ENST00000556353 POLR3DP05423 398 aaPredicted RBP9.8□□□□□ -0.84
PRPF39-209ENST00000556353 PRR23CQ6ZRP0 262 aa9.8□□□□□ -0.84
PRPF39-209ENST00000556353 Q8N3U1 123 aa9.8□□□□□ -0.84
PRPF39-209ENST00000556353 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
PRPF39-209ENST00000556353 CITED4Q96RK1 184 aa9.8□□□□□ -0.84
PRPF39-209ENST00000556353 CEP41Q9BYV8 373 aa9.8□□□□□ -0.84
PRPF39-209ENST00000556353 C19orf57Q0VDD7 668 aa9.79□□□□□ -0.84
PRPF39-209ENST00000556353 IKBKEQ14164 716 aa9.79□□□□□ -0.84
PRPF39-209ENST00000556353 KIAA1211Q6ZU35 1233 aa9.79□□□□□ -0.84
PRPF39-209ENST00000556353 UBASH3BQ8TF42 649 aa9.79□□□□□ -0.84
PRPF39-209ENST00000556353 NLRP12P59046 1061 aa9.78□□□□□ -0.84
PRPF39-209ENST00000556353 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms