RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CASP7P55210 303 aa17.02■□□□□ 0.32
TGFB3-204ENST00000556285 KIF23Q02241 960 aaPredicted RBP17.02■□□□□ 0.32
TGFB3-204ENST00000556285 NOGQ13253 232 aa17.02■□□□□ 0.32
TGFB3-204ENST00000556285 MOB2Q70IA6 237 aa17.02■□□□□ 0.32
TGFB3-204ENST00000556285 TXNRD3Q86VQ6 643 aa17.02■□□□□ 0.32
TGFB3-204ENST00000556285 CDCA5Q96FF9 252 aa17.02■□□□□ 0.32
TGFB3-204ENST00000556285 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
TGFB3-204ENST00000556285 KLRK1P26718 216 aa17.01■□□□□ 0.31
TGFB3-204ENST00000556285 RGS19P49795 217 aa17.01■□□□□ 0.31
TGFB3-204ENST00000556285 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
TGFB3-204ENST00000556285 DGKZQ13574 1117 aa17.01■□□□□ 0.31
TGFB3-204ENST00000556285 SCARF1Q14162 830 aa17.01■□□□□ 0.31
TGFB3-204ENST00000556285 ANGEL2Q5VTE6 544 aaKnown RBP17.01■□□□□ 0.31
TGFB3-204ENST00000556285 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
TGFB3-204ENST00000556285 USP17L3A6NCW0 530 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 USP17L4A6NCW7 530 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 SLC10A3P09131 477 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
TGFB3-204ENST00000556285 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
TGFB3-204ENST00000556285 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 MED23Q9ULK4 1368 aa17■□□□□ 0.31
TGFB3-204ENST00000556285 CACNA1FO60840 1977 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 ECM29Q5VYK3 1845 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 ANP32CO43423 234 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 CA12O43570 354 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 ITGA6P23229 1130 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 ZNF157P51786 506 aaPredicted RBP16.99■□□□□ 0.31
TGFB3-204ENST00000556285 PODNQ7Z5L7 613 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 PLA2G12BQ9BX93 195 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
TGFB3-204ENST00000556285 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
TGFB3-204ENST00000556285 F6X3S4 739 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
TGFB3-204ENST00000556285 CSF1RP07333 972 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 DACT2Q5SW24 774 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 RASAL3Q86YV0 1011 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 CSRNP1Q96S65 589 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 RNF186Q9NXI6 227 aa16.98■□□□□ 0.31
TGFB3-204ENST00000556285 SNAP23O00161 211 aa16.97■□□□□ 0.31
TGFB3-204ENST00000556285 TRPA1O75762 1119 aa16.97■□□□□ 0.31
TGFB3-204ENST00000556285 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
TGFB3-204ENST00000556285 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
TGFB3-204ENST00000556285 FBXW7Q969H0 707 aa16.97■□□□□ 0.31
TGFB3-204ENST00000556285 MLLT1Q03111 559 aaPredicted RBP16.96■□□□□ 0.31
TGFB3-204ENST00000556285 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
TGFB3-204ENST00000556285 FOXO4P98177 505 aa16.95■□□□□ 0.3
TGFB3-204ENST00000556285 COA1Q9GZY4 146 aa16.95■□□□□ 0.3
TGFB3-204ENST00000556285 LEMD3Q9Y2U8 911 aa16.95■□□□□ 0.3
TGFB3-204ENST00000556285 ZNF804BA4D1E1 1349 aa16.95■□□□□ 0.3
TGFB3-204ENST00000556285 LAMB1P07942 1786 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 CHRNDQ07001 517 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 HELBQ8NG08 1087 aaPredicted RBP16.94■□□□□ 0.3
TGFB3-204ENST00000556285 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
TGFB3-204ENST00000556285 UBE2Q2LH0YL09 131 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 TAF5LO75529 589 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 STRIP1Q5VSL9 837 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 FZD1Q9UP38 647 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
TGFB3-204ENST00000556285 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
TGFB3-204ENST00000556285 WNT10BO00744 389 aa16.92■□□□□ 0.3
TGFB3-204ENST00000556285 SASH1O94885 1247 aa16.92■□□□□ 0.3
TGFB3-204ENST00000556285 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
TGFB3-204ENST00000556285 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
TGFB3-204ENST00000556285 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
TGFB3-204ENST00000556285 SLC34A2O95436 690 aa16.91■□□□□ 0.3
TGFB3-204ENST00000556285 SOX10P56693 466 aa16.91■□□□□ 0.3
TGFB3-204ENST00000556285 GTF2IP78347 998 aa16.91■□□□□ 0.3
TGFB3-204ENST00000556285 TTLL5Q6EMB2 1281 aa16.91■□□□□ 0.3
TGFB3-204ENST00000556285 KIAA0825Q8IV33 1275 aa16.91■□□□□ 0.3
TGFB3-204ENST00000556285 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
TGFB3-204ENST00000556285 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
TGFB3-204ENST00000556285 KCNJ4P48050 445 aa16.9■□□□□ 0.3
TGFB3-204ENST00000556285 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
TGFB3-204ENST00000556285 CD209Q9NNX6 404 aa16.9■□□□□ 0.3
TGFB3-204ENST00000556285 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
TGFB3-204ENST00000556285 AOX1Q06278 1338 aa16.9■□□□□ 0.3
TGFB3-204ENST00000556285 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.3
TGFB3-204ENST00000556285 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
TGFB3-204ENST00000556285 IFIT5Q13325 482 aaKnown RBP16.89■□□□□ 0.29
TGFB3-204ENST00000556285 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
TGFB3-204ENST00000556285 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
TGFB3-204ENST00000556285 R3HDMLQ9H3Y0 253 aa16.89■□□□□ 0.29
TGFB3-204ENST00000556285 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
TGFB3-204ENST00000556285 GRM8O00222 908 aa16.88■□□□□ 0.29
TGFB3-204ENST00000556285 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
TGFB3-204ENST00000556285 ZBED3Q96IU2 234 aaPredicted RBP16.88■□□□□ 0.29
TGFB3-204ENST00000556285 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms