RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SDSP20132 328 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
ATXN3-235ENST00000556082 CWF19L2Q2TBE0 894 aaKnown RBP10.19□□□□□ -0.78
ATXN3-235ENST00000556082 NBPF14Q5TI25 921 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 NBPF10Q6P3W6 841 aaKnown RBP10.19□□□□□ -0.78
ATXN3-235ENST00000556082 BARGINQ6ZT62 677 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 ERC1Q8IUD2 1116 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 CRIPAKQ8N1N5 446 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 NBPF15Q8N660 670 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 KAZALD1Q96I82 304 aa10.19□□□□□ -0.78
ATXN3-235ENST00000556082 LRP6O75581 1613 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 COL16A1Q07092 1604 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-235ENST00000556082 PAPPAQ13219 1627 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 USP42Q9H9J4 1324 aaKnown RBP10.18□□□□□ -0.78
ATXN3-235ENST00000556082 AVPP01185 164 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 MX1P20591 662 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
ATXN3-235ENST00000556082 CASC1Q6TDU7 716 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 RHPN1Q8TCX5 695 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 PIGBQ92521 554 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 UBR2Q8IWV8 1755 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 SHANK3Q9BYB0 1731 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 C5P01031 1676 aa10.18□□□□□ -0.78
ATXN3-235ENST00000556082 WNT7AO00755 349 aa10.17□□□□□ -0.78
ATXN3-235ENST00000556082 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
ATXN3-235ENST00000556082 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
ATXN3-235ENST00000556082 RABL6Q3YEC7 729 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-235ENST00000556082 SNX21Q969T3 373 aa10.17□□□□□ -0.78
ATXN3-235ENST00000556082 SUCLG2Q96I99 432 aa10.17□□□□□ -0.78
ATXN3-235ENST00000556082 MYD88Q99836 296 aa10.17□□□□□ -0.78
ATXN3-235ENST00000556082 ATG3Q9NT62 314 aa10.17□□□□□ -0.78
ATXN3-235ENST00000556082 BCL9O00512 1426 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 PLCH1Q4KWH8 1693 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 H7C1W4 665 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 APBB1O00213 710 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
ATXN3-235ENST00000556082 ZMYND10O75800 440 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 STARD3NLO95772 234 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 TRIM32Q13049 653 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 USP35Q9P2H5 1018 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
ATXN3-235ENST00000556082 SPATA31A5Q5VU36 1347 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 TTC41PQ6P2S7 1318 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 SPATA31A7Q8IWB4 1347 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 PTCD1O75127 700 aaKnown RBP10.15□□□□□ -0.78
ATXN3-235ENST00000556082 REC8O95072 547 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 CASP7P55210 303 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 CCDC191Q8NCU4 936 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
ATXN3-235ENST00000556082 BICC1Q9H694 974 aaKnown RBP10.15□□□□□ -0.78
ATXN3-235ENST00000556082 COPRSQ9NQ92 184 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 SLIT2O94813 1529 aa10.15□□□□□ -0.78
ATXN3-235ENST00000556082 PHLPP1O60346 1717 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 ADAMTS2O95450 1211 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 A1BGP04217 495 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-235ENST00000556082 G3BP1Q13283 466 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATXN3-235ENST00000556082 CLASRPQ8N2M8 674 aaKnown RBP10.14□□□□□ -0.79
ATXN3-235ENST00000556082 KIF2CQ99661 725 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 USP26Q9BXU7 913 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 TBC1D2Q9BYX2 928 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 ASAP1Q9ULH1 1129 aa10.14□□□□□ -0.79
ATXN3-235ENST00000556082 A0A087WZG4 1122 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 ERC2O15083 957 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 RFX5P48382 616 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-235ENST00000556082 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-235ENST00000556082 DDB1Q16531 1140 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 AMHR2Q16671 573 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 TTLL7Q6ZT98 887 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 RETREG3Q86VR2 466 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 SNIP1Q8TAD8 396 aaKnown RBP10.13□□□□□ -0.79
ATXN3-235ENST00000556082 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 ISCA1Q9BUE6 129 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 IL1RAPL2Q9NP60 686 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 CWC25Q9NXE8 425 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-235ENST00000556082 TOGARAM1Q9Y4F4 1720 aa10.13□□□□□ -0.79
ATXN3-235ENST00000556082 TTC24A2A3L6 582 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-235ENST00000556082 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 GLRX3O76003 335 aaKnown RBP10.12□□□□□ -0.79
ATXN3-235ENST00000556082 CYP19A1P11511 503 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-235ENST00000556082 JUNDP17535 347 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 CHMLP26374 656 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 WNT7BP56706 349 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 OS9Q13438 667 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-235ENST00000556082 TCIRG1Q13488 830 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 UNC5CLQ8IV45 518 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 IL17RAQ96F46 866 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 GPATCH3Q96I76 525 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 JCADQ9P266 1359 aa10.12□□□□□ -0.79
ATXN3-235ENST00000556082 NRAPQ86VF7 1730 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 NWD2Q9ULI1 1742 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 SASH1O94885 1247 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 PIP4K2AP48426 406 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms