RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 NPAS4Q8IUM7 802 aa10.35□□□□□ -0.75
LINC00871-202ENST00000556071 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
LINC00871-202ENST00000556071 IRS1P35568 1242 aa10.34□□□□□ -0.75
LINC00871-202ENST00000556071 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
LINC00871-202ENST00000556071 POP1Q99575 1024 aaKnown RBP10.34□□□□□ -0.75
LINC00871-202ENST00000556071 LACRTQ9GZZ8 138 aa10.34□□□□□ -0.75
LINC00871-202ENST00000556071 A0A1W2PP55 124 aa10.33□□□□□ -0.76
LINC00871-202ENST00000556071 EPS8L3Q8TE67 593 aaKnown RBP10.33□□□□□ -0.76
LINC00871-202ENST00000556071 PLVAPQ9BX97 442 aa10.33□□□□□ -0.76
LINC00871-202ENST00000556071 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
LINC00871-202ENST00000556071 PDE2AO00408 941 aaPredicted RBP10.32□□□□□ -0.76
LINC00871-202ENST00000556071 MFAP1P55081 439 aaKnown RBP10.32□□□□□ -0.76
LINC00871-202ENST00000556071 SUZ12Q15022 739 aaKnown RBP10.32□□□□□ -0.76
LINC00871-202ENST00000556071 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
LINC00871-202ENST00000556071 PI16Q6UXB8 463 aa10.32□□□□□ -0.76
LINC00871-202ENST00000556071 PIK3R2O00459 728 aa10.31□□□□□ -0.76
LINC00871-202ENST00000556071 BAG6P46379 1132 aa10.31□□□□□ -0.76
LINC00871-202ENST00000556071 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
LINC00871-202ENST00000556071 DMRTC2Q8IXT2 367 aaPredicted RBP10.31□□□□□ -0.76
LINC00871-202ENST00000556071 TMEM102Q8N9M5 508 aaPredicted RBP10.31□□□□□ -0.76
LINC00871-202ENST00000556071 NXPE3Q969Y0 559 aa10.31□□□□□ -0.76
LINC00871-202ENST00000556071 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
LINC00871-202ENST00000556071 KIAA0319Q5VV43 1072 aa10.3□□□□□ -0.76
LINC00871-202ENST00000556071 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
LINC00871-202ENST00000556071 IL22RA1Q8N6P7 574 aa10.3□□□□□ -0.76
LINC00871-202ENST00000556071 METTL12A8MUP2 240 aa10.29□□□□□ -0.76
LINC00871-202ENST00000556071 RNF225M0QZC1 329 aaPredicted RBP10.29□□□□□ -0.76
LINC00871-202ENST00000556071 PTPRAP18433 802 aa10.29□□□□□ -0.76
LINC00871-202ENST00000556071 COL8A1P27658 744 aa10.29□□□□□ -0.76
LINC00871-202ENST00000556071 COL19A1Q14993 1142 aa10.29□□□□□ -0.76
LINC00871-202ENST00000556071 BHLHE41Q9C0J9 482 aaPredicted RBP10.29□□□□□ -0.76
LINC00871-202ENST00000556071 LIN7BQ9HAP6 207 aa10.29□□□□□ -0.76
LINC00871-202ENST00000556071 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
LINC00871-202ENST00000556071 LDHBP07195 334 aaKnown RBP10.28□□□□□ -0.76
LINC00871-202ENST00000556071 ERCC3P19447 782 aa10.28□□□□□ -0.76
LINC00871-202ENST00000556071 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
LINC00871-202ENST00000556071 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC00871-202ENST00000556071 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
LINC00871-202ENST00000556071 TCF12Q99081 682 aa10.28□□□□□ -0.76
LINC00871-202ENST00000556071 EHD4Q9H223 541 aa10.28□□□□□ -0.76
LINC00871-202ENST00000556071 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
LINC00871-202ENST00000556071 NOP53Q9NZM5 478 aaKnown RBP10.28□□□□□ -0.76
LINC00871-202ENST00000556071 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 EPHA1P21709 976 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 CDC27P30260 824 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 ALG1LQ6GMV1 187 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 CCNJLQ8IV13 435 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 ASAP3Q8TDY4 903 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 FBF1Q8TES7 1133 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 ADAM19Q9H013 955 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.77
LINC00871-202ENST00000556071 A0A0A0MRY4 1105 aa10.26□□□□□ -0.77
LINC00871-202ENST00000556071 GRIA4P48058 902 aa10.26□□□□□ -0.77
LINC00871-202ENST00000556071 GRM2Q14416 872 aa10.26□□□□□ -0.77
LINC00871-202ENST00000556071 CACTIN-AS1Q8N1I8 211 aa10.26□□□□□ -0.77
LINC00871-202ENST00000556071 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
LINC00871-202ENST00000556071 CDC25BP30305 580 aa10.25□□□□□ -0.77
LINC00871-202ENST00000556071 TXNDC11Q6PKC3 985 aa10.25□□□□□ -0.77
LINC00871-202ENST00000556071 FBXO33Q7Z6M2 555 aa10.25□□□□□ -0.77
LINC00871-202ENST00000556071 SOX13Q9UN79 622 aa10.25□□□□□ -0.77
LINC00871-202ENST00000556071 PPME1Q9Y570 386 aa10.25□□□□□ -0.77
LINC00871-202ENST00000556071 LINC01387J3KSC0 135 aa10.24□□□□□ -0.77
LINC00871-202ENST00000556071 GSK3AP49840 483 aa10.24□□□□□ -0.77
LINC00871-202ENST00000556071 SPRED3Q2MJR0 410 aa10.24□□□□□ -0.77
LINC00871-202ENST00000556071 GLIS3Q8NEA6 775 aa10.24□□□□□ -0.77
LINC00871-202ENST00000556071 BSNDQ8WZ55 320 aa10.24□□□□□ -0.77
LINC00871-202ENST00000556071 MUC3BQ9H195 1237 aa10.24□□□□□ -0.77
LINC00871-202ENST00000556071 FAM177BA6PVY3 158 aa10.23□□□□□ -0.77
LINC00871-202ENST00000556071 PRPF40AO75400 957 aaKnown RBP10.23□□□□□ -0.77
LINC00871-202ENST00000556071 TAGLNQ01995 201 aaKnown RBP10.23□□□□□ -0.77
LINC00871-202ENST00000556071 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
LINC00871-202ENST00000556071 TRIM28Q13263 835 aaKnown RBP10.23□□□□□ -0.77
LINC00871-202ENST00000556071 FMR1NBQ8N0W7 255 aaPredicted RBP10.23□□□□□ -0.77
LINC00871-202ENST00000556071 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
LINC00871-202ENST00000556071 ABCB6Q9NP58 842 aa10.23□□□□□ -0.77
LINC00871-202ENST00000556071 RNF19AQ9NV58 838 aa10.23□□□□□ -0.77
LINC00871-202ENST00000556071 A0A096LPE4 126 aa10.22□□□□□ -0.77
LINC00871-202ENST00000556071 A0A1W2PPZ6 126 aa10.22□□□□□ -0.77
LINC00871-202ENST00000556071 DEAF1O75398 565 aaPredicted RBP10.22□□□□□ -0.77
LINC00871-202ENST00000556071 RAC1P63000 192 aa10.22□□□□□ -0.77
LINC00871-202ENST00000556071 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
LINC00871-202ENST00000556071 PRPF40BQ6NWY9 871 aaKnown RBP10.22□□□□□ -0.77
LINC00871-202ENST00000556071 NXPE4Q6UWF7 544 aa10.22□□□□□ -0.77
LINC00871-202ENST00000556071 VN1R5Q7Z5H4 357 aa10.22□□□□□ -0.77
LINC00871-202ENST00000556071 RASSF7Q02833 373 aa10.21□□□□□ -0.77
LINC00871-202ENST00000556071 SETDB1Q15047 1291 aa10.21□□□□□ -0.77
LINC00871-202ENST00000556071 DTWD1Q8N5C7 304 aa10.21□□□□□ -0.77
LINC00871-202ENST00000556071 DUSP9Q99956 384 aaKnown RBP10.21□□□□□ -0.77
LINC00871-202ENST00000556071 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
LINC00871-202ENST00000556071 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 H3BRJ5 948 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 CABP4P57796 275 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 BCL2L13Q9BXK5 485 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 OSBPL7Q9BZF2 842 aa10.2□□□□□ -0.78
LINC00871-202ENST00000556071 GRIK4Q16099 956 aa10.19□□□□□ -0.78
LINC00871-202ENST00000556071 FBXO11Q86XK2 927 aa10.19□□□□□ -0.78
LINC00871-202ENST00000556071 CARD10Q9BWT7 1032 aa10.19□□□□□ -0.78
LINC00871-202ENST00000556071 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms