RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 USP17L4A6NCW7 530 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 H7C1W4 665 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 USP17L8P0C7I0 530 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 DGKZQ13574 1117 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 MOB2Q70IA6 237 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 USP17L1Q7RTZ2 530 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 RASAL3Q86YV0 1011 aa18.5■□□□□ 0.55
CHMP4BP1-201ENST00000556017 PITPNM2Q9BZ72 1349 aa18.49■□□□□ 0.55
CHMP4BP1-201ENST00000556017 KLRK1P26718 216 aa18.49■□□□□ 0.55
CHMP4BP1-201ENST00000556017 NBPF9Q3BBW0 867 aa18.49■□□□□ 0.55
CHMP4BP1-201ENST00000556017 WWC1Q8IX03 1113 aa18.49■□□□□ 0.55
CHMP4BP1-201ENST00000556017 TRPA1O75762 1119 aa18.48■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CCT4P50991 539 aaKnown RBP18.48■□□□□ 0.55
CHMP4BP1-201ENST00000556017 MLLT1Q03111 559 aaPredicted RBP18.48■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
CHMP4BP1-201ENST00000556017 IRS2Q9Y4H2 1338 aa18.48■□□□□ 0.55
CHMP4BP1-201ENST00000556017 G3V3G9 751 aa18.47■□□□□ 0.55
CHMP4BP1-201ENST00000556017 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
CHMP4BP1-201ENST00000556017 PRAMEF18Q5VWM3 479 aa18.47■□□□□ 0.55
CHMP4BP1-201ENST00000556017 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
CHMP4BP1-201ENST00000556017 PLA2G12BQ9BX93 195 aa18.47■□□□□ 0.55
CHMP4BP1-201ENST00000556017 WNT10BO00744 389 aa18.46■□□□□ 0.55
CHMP4BP1-201ENST00000556017 CSF1RP07333 972 aa18.46■□□□□ 0.55
CHMP4BP1-201ENST00000556017 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
CHMP4BP1-201ENST00000556017 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
CHMP4BP1-201ENST00000556017 FKBP1BP68106 108 aa18.45■□□□□ 0.54
CHMP4BP1-201ENST00000556017 GCKRQ14397 625 aa18.45■□□□□ 0.54
CHMP4BP1-201ENST00000556017 ZBED3Q96IU2 234 aaPredicted RBP18.45■□□□□ 0.54
CHMP4BP1-201ENST00000556017 PDE4DIPQ5VU43 2346 aa18.45■□□□□ 0.54
CHMP4BP1-201ENST00000556017 SNAP23O00161 211 aa18.44■□□□□ 0.54
CHMP4BP1-201ENST00000556017 STRIP1Q5VSL9 837 aa18.44■□□□□ 0.54
CHMP4BP1-201ENST00000556017 CHMP4AQ9BY43 222 aa18.44■□□□□ 0.54
CHMP4BP1-201ENST00000556017 IL16Q14005 1332 aa18.44■□□□□ 0.54
CHMP4BP1-201ENST00000556017 UBE2Q2LH0YL09 131 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 ITGA6P23229 1130 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 NEXNQ0ZGT2 675 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 FLIIQ13045 1269 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 STK31Q9BXU1 1019 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 COA1Q9GZY4 146 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 LEMD3Q9Y2U8 911 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 ECM29Q5VYK3 1845 aa18.43■□□□□ 0.54
CHMP4BP1-201ENST00000556017 LAMB1P07942 1786 aa18.42■□□□□ 0.54
CHMP4BP1-201ENST00000556017 SLC34A2O95436 690 aa18.42■□□□□ 0.54
CHMP4BP1-201ENST00000556017 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
CHMP4BP1-201ENST00000556017 ZNF804BA4D1E1 1349 aa18.42■□□□□ 0.54
CHMP4BP1-201ENST00000556017 FANCIQ9NVI1 1328 aa18.42■□□□□ 0.54
CHMP4BP1-201ENST00000556017 VAMP4O75379 141 aa18.41■□□□□ 0.54
CHMP4BP1-201ENST00000556017 SASH1O94885 1247 aa18.41■□□□□ 0.54
CHMP4BP1-201ENST00000556017 HTTP42858 3142 aa18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 FOXO4P98177 505 aa18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 CERS5Q8N5B7 392 aa18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 LINS1Q8NG48 757 aa18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 DNAAF4Q8WXU2 420 aa18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 MYO3BQ8WXR4 1341 aa18.4■□□□□ 0.54
CHMP4BP1-201ENST00000556017 SSC5DA1L4H1 1573 aa18.39■□□□□ 0.53
CHMP4BP1-201ENST00000556017 IGHMBP2P38935 993 aaKnown RBP18.39■□□□□ 0.53
CHMP4BP1-201ENST00000556017 CHRNDQ07001 517 aa18.39■□□□□ 0.53
CHMP4BP1-201ENST00000556017 PCDHAC2Q9Y5I4 1007 aa18.39■□□□□ 0.53
CHMP4BP1-201ENST00000556017 GTF2IP78347 998 aa18.38■□□□□ 0.53
CHMP4BP1-201ENST00000556017 TTLL5Q6EMB2 1281 aa18.38■□□□□ 0.53
CHMP4BP1-201ENST00000556017 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
CHMP4BP1-201ENST00000556017 REM2Q8IYK8 340 aaPredicted RBP18.38■□□□□ 0.53
CHMP4BP1-201ENST00000556017 TM4SF4P48230 202 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 EPHA10Q5JZY3 1008 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 LDLRAD1Q5T700 205 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 C15orf52Q6ZUT6 534 aaKnown RBP18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 CTU1Q7Z7A3 348 aaKnown RBP18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 OGFOD1Q8N543 542 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 ANKRD2Q9GZV1 360 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 CD209Q9NNX6 404 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 AOX1Q06278 1338 aa18.37■□□□□ 0.53
CHMP4BP1-201ENST00000556017 F6X3S4 739 aa18.36■□□□□ 0.53
CHMP4BP1-201ENST00000556017 TAF5LO75529 589 aa18.36■□□□□ 0.53
CHMP4BP1-201ENST00000556017 TBC1D8O95759 1140 aa18.36■□□□□ 0.53
CHMP4BP1-201ENST00000556017 BEND3Q5T5X7 828 aa18.36■□□□□ 0.53
CHMP4BP1-201ENST00000556017 HELBQ8NG08 1087 aaPredicted RBP18.36■□□□□ 0.53
CHMP4BP1-201ENST00000556017 MMP14P50281 582 aa18.35■□□□□ 0.53
CHMP4BP1-201ENST00000556017 SOX10P56693 466 aa18.35■□□□□ 0.53
CHMP4BP1-201ENST00000556017 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
CHMP4BP1-201ENST00000556017 ZNF296Q8WUU4 475 aaPredicted RBP18.35■□□□□ 0.53
CHMP4BP1-201ENST00000556017 MPHOSPH8Q99549 860 aa18.35■□□□□ 0.53
CHMP4BP1-201ENST00000556017 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
CHMP4BP1-201ENST00000556017 MTMR14Q8NCE2 650 aa18.34■□□□□ 0.53
CHMP4BP1-201ENST00000556017 IL1R1P14778 569 aa18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 NOM1Q5C9Z4 860 aaKnown RBP18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 WDR63Q8IWG1 891 aa18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 CFHR5Q9BXR6 569 aa18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 HPS5Q9UPZ3 1129 aa18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 OTOFQ9HC10 1997 aa18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.52
CHMP4BP1-201ENST00000556017 CENPFP49454 3210 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms