RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 UBASH3BQ8TF42 649 aa7.86□□□□□ -1.15
SRP54-207ENST00000555535 OSGEPQ9NPF4 335 aa7.86□□□□□ -1.15
SRP54-207ENST00000555535 ATP11AP98196 1134 aa7.85□□□□□ -1.15
SRP54-207ENST00000555535 ANKMY2Q8IV38 441 aa7.85□□□□□ -1.15
SRP54-207ENST00000555535 RUSC1Q9BVN2 902 aa7.85□□□□□ -1.15
SRP54-207ENST00000555535 FNDC3AQ9Y2H6 1198 aaKnown RBP7.85□□□□□ -1.15
SRP54-207ENST00000555535 MAFBQ9Y5Q3 323 aaPredicted RBP7.85□□□□□ -1.15
SRP54-207ENST00000555535 MEGF11A6BM72 1044 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 FAM196BA6NMK8 535 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 ADAM11O75078 769 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 CDC25BP30305 580 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 SCNN1AP37088 669 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 TTC39BQ5VTQ0 682 aaPredicted RBP7.84□□□□□ -1.15
SRP54-207ENST00000555535 KLHDC7BQ96G42 594 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 PBX4Q9BYU1 374 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 ADAM19Q9H013 955 aa7.84□□□□□ -1.15
SRP54-207ENST00000555535 H3BRJ5 948 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 BIN1O00499 593 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 F13BP05160 661 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 EPHA1P21709 976 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
SRP54-207ENST00000555535 FBXL6Q8N531 539 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 PIK3R5Q8WYR1 880 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 KRTAP4-11Q9BYQ6 195 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 TFIP11Q9UBB9 837 aaKnown RBP7.83□□□□□ -1.16
SRP54-207ENST00000555535 LRFN2Q9ULH4 789 aa7.83□□□□□ -1.16
SRP54-207ENST00000555535 UBAP1LF5GYI3 381 aa7.82□□□□□ -1.16
SRP54-207ENST00000555535 DDX3YO15523 660 aaKnown RBP7.82□□□□□ -1.16
SRP54-207ENST00000555535 RASSF4Q9H2L5 321 aa7.82□□□□□ -1.16
SRP54-207ENST00000555535 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L10C9JJH3 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L12C9JPN9 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L21D6R901 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 LGR5O75473 907 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 KIF4AO95239 1232 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 BRD2P25440 801 aaKnown RBP7.81□□□□□ -1.16
SRP54-207ENST00000555535 RXRBP28702 533 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 ARL4DP49703 201 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 PKN1Q16512 942 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 LCE4AQ5TA78 99 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 PAOXQ6QHF9 649 aa7.81□□□□□ -1.16
SRP54-207ENST00000555535 CYP26A1O43174 497 aa7.8□□□□□ -1.16
SRP54-207ENST00000555535 TRIP4Q15650 581 aaPredicted RBP7.8□□□□□ -1.16
SRP54-207ENST00000555535 COL13A1Q5TAT6 717 aaPredicted RBP7.8□□□□□ -1.16
SRP54-207ENST00000555535 FLCNQ8NFG4 579 aa7.8□□□□□ -1.16
SRP54-207ENST00000555535 SH2B1Q9NRF2 756 aaPredicted RBP7.8□□□□□ -1.16
SRP54-207ENST00000555535 FAM95CA0A1B0GW59 222 aa7.79□□□□□ -1.16
SRP54-207ENST00000555535 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
SRP54-207ENST00000555535 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
SRP54-207ENST00000555535 NFXL1Q6ZNB6 911 aa7.79□□□□□ -1.16
SRP54-207ENST00000555535 UBTFP17480 764 aaKnown RBP7.78□□□□□ -1.16
SRP54-207ENST00000555535 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
SRP54-207ENST00000555535 COX20Q5RI15 118 aa7.78□□□□□ -1.16
SRP54-207ENST00000555535 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
SRP54-207ENST00000555535 SUGCTQ9HAC7 445 aa7.78□□□□□ -1.16
SRP54-207ENST00000555535 CYP4F12Q9HCS2 524 aa7.78□□□□□ -1.16
SRP54-207ENST00000555535 FARP2O94887 1054 aaPredicted RBP7.77□□□□□ -1.17
SRP54-207ENST00000555535 NLRP12P59046 1061 aa7.77□□□□□ -1.17
SRP54-207ENST00000555535 KANK4Q5T7N3 995 aaPredicted RBP7.77□□□□□ -1.17
SRP54-207ENST00000555535 CEP120Q8N960 986 aa7.77□□□□□ -1.17
SRP54-207ENST00000555535 SMG8Q8ND04 991 aaKnown RBP7.77□□□□□ -1.17
SRP54-207ENST00000555535 YIPF2Q9BWQ6 316 aa7.77□□□□□ -1.17
SRP54-207ENST00000555535 VRTNQ9H8Y1 702 aa7.77□□□□□ -1.17
SRP54-207ENST00000555535 PAK6Q9NQU5 681 aaPredicted RBP7.77□□□□□ -1.17
SRP54-207ENST00000555535 A6NJR5 290 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 FLIIQ13045 1269 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 NFKBIBQ15653 356 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 ZNF648Q5T619 568 aaPredicted RBP7.76□□□□□ -1.17
SRP54-207ENST00000555535 SPOCD1Q6ZMY3 1216 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 ETFBKMTQ8IXQ9 262 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 C12orf50Q8NA57 414 aaPredicted RBP7.76□□□□□ -1.17
SRP54-207ENST00000555535 POP1Q99575 1024 aaKnown RBP7.76□□□□□ -1.17
SRP54-207ENST00000555535 ZMYND15Q9H091 742 aa7.76□□□□□ -1.17
SRP54-207ENST00000555535 ABI2Q9NYB9 513 aaPredicted RBP7.76□□□□□ -1.17
SRP54-207ENST00000555535 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
SRP54-207ENST00000555535 PAPLNO95428 1278 aa7.75□□□□□ -1.17
SRP54-207ENST00000555535 USP11P51784 963 aa7.75□□□□□ -1.17
SRP54-207ENST00000555535 CYP27A1Q02318 531 aa7.75□□□□□ -1.17
SRP54-207ENST00000555535 C19orf57Q0VDD7 668 aa7.75□□□□□ -1.17
SRP54-207ENST00000555535 COL26A1Q96A83 441 aa7.75□□□□□ -1.17
SRP54-207ENST00000555535 TIAF1O95411 115 aa7.74□□□□□ -1.17
SRP54-207ENST00000555535 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
SRP54-207ENST00000555535 ZAR1Q86SH2 424 aa7.74□□□□□ -1.17
SRP54-207ENST00000555535 ARXQ96QS3 562 aa7.74□□□□□ -1.17
SRP54-207ENST00000555535 TMPRSS13Q9BYE2 586 aa7.74□□□□□ -1.17
SRP54-207ENST00000555535 C16orf46Q6P387 395 aa7.73□□□□□ -1.17
SRP54-207ENST00000555535 ADAMTSL4Q6UY14 1074 aa7.73□□□□□ -1.17
SRP54-207ENST00000555535 STK11IPQ8N1F8 1099 aa7.73□□□□□ -1.17
SRP54-207ENST00000555535 GLMNQ92990 594 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms