RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 LPIN3Q9BQK8 851 aa7.19□□□□□ -1.26
KTN1-222ENST00000555506 POLIQ9UNA4 740 aa7.19□□□□□ -1.26
KTN1-222ENST00000555506 LILRB5O75023 590 aa7.18□□□□□ -1.26
KTN1-222ENST00000555506 PSAPP07602 524 aa7.18□□□□□ -1.26
KTN1-222ENST00000555506 MZF1P28698 734 aaPredicted RBP7.18□□□□□ -1.26
KTN1-222ENST00000555506 DNM1Q05193 864 aaKnown RBP7.18□□□□□ -1.26
KTN1-222ENST00000555506 PCSK7Q16549 785 aa7.18□□□□□ -1.26
KTN1-222ENST00000555506 PERM1Q5SV97 790 aa7.18□□□□□ -1.26
KTN1-222ENST00000555506 NSUN5Q96P11 429 aaKnown RBP7.18□□□□□ -1.26
KTN1-222ENST00000555506 BCL11AQ9H165 835 aa7.18□□□□□ -1.26
KTN1-222ENST00000555506 IGSF5Q9NSI5 407 aa7.18□□□□□ -1.26
KTN1-222ENST00000555506 J3QW42 95 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 PDGFAP04085 211 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 VAMP1P23763 118 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 SOX18P35713 384 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 AFF1P51825 1210 aaKnown RBP7.17□□□□□ -1.26
KTN1-222ENST00000555506 PLCB3Q01970 1234 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 PRSS36Q5K4E3 855 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 GJD3Q8N144 294 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
KTN1-222ENST00000555506 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 FNDC3AQ9Y2H6 1198 aaKnown RBP7.17□□□□□ -1.26
KTN1-222ENST00000555506 A6NHS1 94 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 GPR182O15218 404 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 RGS9O75916 674 aaPredicted RBP7.17□□□□□ -1.26
KTN1-222ENST00000555506 EHHADHQ08426 723 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 GRIK5Q16478 980 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 FRRS1LQ9P0K9 344 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 TMEM63CQ9P1W3 806 aa7.17□□□□□ -1.26
KTN1-222ENST00000555506 LOC102724428A0A0B4J2F2 783 aa7.16□□□□□ -1.26
KTN1-222ENST00000555506 HYAL3O43820 417 aaPredicted RBP7.16□□□□□ -1.26
KTN1-222ENST00000555506 SPATA31C1P0DKV0 1188 aa7.16□□□□□ -1.26
KTN1-222ENST00000555506 HOXD8P13378 290 aaPredicted RBP7.16□□□□□ -1.26
KTN1-222ENST00000555506 EIF2AK2P19525 551 aaKnown RBP7.16□□□□□ -1.26
KTN1-222ENST00000555506 SIK1P57059 783 aa7.16□□□□□ -1.26
KTN1-222ENST00000555506 FGD1P98174 961 aa7.16□□□□□ -1.26
KTN1-222ENST00000555506 COL13A1Q5TAT6 717 aaPredicted RBP7.16□□□□□ -1.26
KTN1-222ENST00000555506 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
KTN1-222ENST00000555506 OR13H1Q8NG92 308 aa7.16□□□□□ -1.26
KTN1-222ENST00000555506 ABI2Q9NYB9 513 aaPredicted RBP7.16□□□□□ -1.26
KTN1-222ENST00000555506 CYP2E1P05181 493 aaPredicted RBP7.15□□□□□ -1.27
KTN1-222ENST00000555506 PCSK2P16519 638 aa7.15□□□□□ -1.27
KTN1-222ENST00000555506 PDE12Q6L8Q7 609 aaKnown RBP7.15□□□□□ -1.27
KTN1-222ENST00000555506 SMG9Q9H0W8 520 aaKnown RBP7.15□□□□□ -1.27
KTN1-222ENST00000555506 ELP3Q9H9T3 547 aa7.15□□□□□ -1.27
KTN1-222ENST00000555506 LDHBP07195 334 aaKnown RBP7.14□□□□□ -1.27
KTN1-222ENST00000555506 MAPK8P45983 427 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 XKR5Q6UX68 686 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 ILDR2Q71H61 639 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 ZNF438Q7Z4V0 828 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 TPSG1Q9NRR2 321 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 CNTN3Q9P232 1028 aa7.14□□□□□ -1.27
KTN1-222ENST00000555506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.14□□□□□ -1.27
KTN1-222ENST00000555506 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
KTN1-222ENST00000555506 RPLP1P05386 114 aaKnown RBP7.13□□□□□ -1.27
KTN1-222ENST00000555506 TRAPPC3LQ5T215 181 aa7.13□□□□□ -1.27
KTN1-222ENST00000555506 TTC39BQ5VTQ0 682 aaPredicted RBP7.13□□□□□ -1.27
KTN1-222ENST00000555506 TTC9Q92623 222 aa7.13□□□□□ -1.27
KTN1-222ENST00000555506 PLD4Q96BZ4 506 aa7.13□□□□□ -1.27
KTN1-222ENST00000555506 FMNL2Q96PY5 1086 aa7.13□□□□□ -1.27
KTN1-222ENST00000555506 NIF3L1Q9GZT8 377 aa7.13□□□□□ -1.27
KTN1-222ENST00000555506 SPDYE3A6NKU9 549 aa7.12□□□□□ -1.27
KTN1-222ENST00000555506 GHRHP01286 108 aa7.12□□□□□ -1.27
KTN1-222ENST00000555506 ENOX2Q16206 610 aaKnown RBP7.12□□□□□ -1.27
KTN1-222ENST00000555506 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
KTN1-222ENST00000555506 A0A0A0MRY4 1105 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 APBA3O96018 575 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 TCF3P15923 654 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 ATP2B2Q01814 1243 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
KTN1-222ENST00000555506 PRRT3Q5FWE3 981 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 MSL1Q68DK7 614 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 TTC16Q8NEE8 873 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 KANSL3Q9P2N6 904 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 COL17A1Q9UMD9 1497 aaPredicted RBP7.11□□□□□ -1.27
KTN1-222ENST00000555506 PNMA6FA0A0J9YX94 578 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 KIF4AO95239 1232 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 RECKO95980 971 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 ATP11AP98196 1134 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 HYAL2Q12891 473 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 MRPL58Q14197 206 aaKnown RBP7.11□□□□□ -1.27
KTN1-222ENST00000555506 GRIK4Q16099 956 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 CHRDQ9H2X0 955 aa7.11□□□□□ -1.27
KTN1-222ENST00000555506 XPCQ01831 940 aaPredicted RBP7.1□□□□□ -1.27
KTN1-222ENST00000555506 ALG1LQ6GMV1 187 aa7.1□□□□□ -1.27
KTN1-222ENST00000555506 GDF6Q6KF10 455 aaPredicted RBP7.1□□□□□ -1.27
KTN1-222ENST00000555506 DUSP9Q99956 384 aaKnown RBP7.1□□□□□ -1.27
KTN1-222ENST00000555506 PARP2Q9UGN5 583 aa7.1□□□□□ -1.27
KTN1-222ENST00000555506 WWC3Q9ULE0 1092 aa7.1□□□□□ -1.27
KTN1-222ENST00000555506 TRIM33Q9UPN9 1127 aa7.1□□□□□ -1.27
KTN1-222ENST00000555506 NEFLP07196 543 aa7.09□□□□□ -1.27
KTN1-222ENST00000555506 ITGAEP38570 1179 aa7.09□□□□□ -1.27
KTN1-222ENST00000555506 TSNAXIP1Q2TAA8 658 aa7.09□□□□□ -1.27
KTN1-222ENST00000555506 ADAMTSL4Q6UY14 1074 aa7.09□□□□□ -1.27
KTN1-222ENST00000555506 TMC4Q7Z404 712 aa7.09□□□□□ -1.27
KTN1-222ENST00000555506 CSRNP1Q96S65 589 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms