RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MCAMP43121 646 aa28.86■■■□□ 2.21
TMEM260-207ENST00000555497 RBSNQ9H1K0 784 aa28.86■■■□□ 2.21
TMEM260-207ENST00000555497 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
TMEM260-207ENST00000555497 FAM177BA6PVY3 158 aa28.85■■■□□ 2.21
TMEM260-207ENST00000555497 LARP1BQ659C4 914 aaKnown RBP28.85■■■□□ 2.21
TMEM260-207ENST00000555497 TTLL5Q6EMB2 1281 aa28.85■■■□□ 2.21
TMEM260-207ENST00000555497 RREB1Q92766 1687 aa28.85■■■□□ 2.21
TMEM260-207ENST00000555497 CAMTA2O94983 1202 aa28.85■■■□□ 2.21
TMEM260-207ENST00000555497 NASPP49321 788 aaPredicted RBP28.85■■■□□ 2.21
TMEM260-207ENST00000555497 PDE8BO95263 885 aa28.84■■■□□ 2.21
TMEM260-207ENST00000555497 DNM1Q05193 864 aaKnown RBP28.84■■■□□ 2.21
TMEM260-207ENST00000555497 WASHC4Q2M389 1173 aa28.83■■■□□ 2.21
TMEM260-207ENST00000555497 CDC37L1Q7L3B6 337 aa28.83■■■□□ 2.21
TMEM260-207ENST00000555497 BRF1Q92994 677 aa28.83■■■□□ 2.21
TMEM260-207ENST00000555497 GTF3C6Q969F1 213 aa28.83■■■□□ 2.21
TMEM260-207ENST00000555497 MYH7P12883 1935 aa28.83■■■□□ 2.21
TMEM260-207ENST00000555497 E7EWF7 191 aa28.82■■■□□ 2.2
TMEM260-207ENST00000555497 LRSAM1Q6UWE0 723 aa28.82■■■□□ 2.2
TMEM260-207ENST00000555497 DHX32Q7L7V1 743 aaKnown RBP28.82■■■□□ 2.2
TMEM260-207ENST00000555497 FAM43AQ8N2R8 423 aa28.82■■■□□ 2.2
TMEM260-207ENST00000555497 ATP6V1DQ9Y5K8 247 aa28.82■■■□□ 2.2
TMEM260-207ENST00000555497 ABCC12Q96J65 1359 aa28.82■■■□□ 2.2
TMEM260-207ENST00000555497 ZFYP08048 801 aaPredicted RBP28.82■■■□□ 2.2
TMEM260-207ENST00000555497 EXOSC10Q01780 885 aaKnown RBP28.82■■■□□ 2.2
TMEM260-207ENST00000555497 HELBQ8NG08 1087 aaPredicted RBP28.82■■■□□ 2.2
TMEM260-207ENST00000555497 PUS7LQ9H0K6 701 aaKnown RBP28.82■■■□□ 2.2
TMEM260-207ENST00000555497 FIBPO43427 364 aa28.81■■■□□ 2.2
TMEM260-207ENST00000555497 JAK2O60674 1132 aa28.81■■■□□ 2.2
TMEM260-207ENST00000555497 LRP5O75197 1615 aa28.81■■■□□ 2.2
TMEM260-207ENST00000555497 MYO5AQ9Y4I1 1855 aaKnown RBP28.81■■■□□ 2.2
TMEM260-207ENST00000555497 HMGB1P09429 215 aaKnown RBP28.79■■■□□ 2.2
TMEM260-207ENST00000555497 LRRFIP1Q32MZ4 808 aaKnown RBP28.79■■■□□ 2.2
TMEM260-207ENST00000555497 APPBP2Q92624 585 aa28.79■■■□□ 2.2
TMEM260-207ENST00000555497 ZNF512BQ96KM6 892 aaPredicted RBP28.79■■■□□ 2.2
TMEM260-207ENST00000555497 UTP14AQ9BVJ6 771 aaKnown RBP28.79■■■□□ 2.2
TMEM260-207ENST00000555497 HSP90B1P14625 803 aaKnown RBP28.79■■■□□ 2.2
TMEM260-207ENST00000555497 PHKA1P46020 1223 aa28.79■■■□□ 2.2
TMEM260-207ENST00000555497 AK7Q96M32 723 aa28.79■■■□□ 2.2
TMEM260-207ENST00000555497 SEC31BQ9NQW1 1179 aa28.79■■■□□ 2.2
TMEM260-207ENST00000555497 CICQ96RK0 1608 aaPredicted RBP28.79■■■□□ 2.2
TMEM260-207ENST00000555497 FERMT3Q86UX7 667 aa28.78■■■□□ 2.2
TMEM260-207ENST00000555497 RRAGDQ9NQL2 400 aaPredicted RBP28.78■■■□□ 2.2
TMEM260-207ENST00000555497 FGFR2P21802 821 aa28.78■■■□□ 2.2
TMEM260-207ENST00000555497 SCRN1Q12765 414 aa28.78■■■□□ 2.2
TMEM260-207ENST00000555497 FAM98CQ17RN3 349 aaKnown RBP28.78■■■□□ 2.2
TMEM260-207ENST00000555497 TPRNQ4KMQ1 711 aa28.78■■■□□ 2.2
TMEM260-207ENST00000555497 DDX60Q8IY21 1712 aaKnown RBP28.78■■■□□ 2.2
TMEM260-207ENST00000555497 TOM1O60784 492 aa28.77■■■□□ 2.2
TMEM260-207ENST00000555497 PRKCSHP14314 528 aaPredicted RBP28.77■■■□□ 2.2
TMEM260-207ENST00000555497 PDCP20941 246 aa28.77■■■□□ 2.2
TMEM260-207ENST00000555497 CCDC102BQ68D86 513 aa28.77■■■□□ 2.2
TMEM260-207ENST00000555497 PIH1D3Q9NQM4 214 aaKnown RBP28.77■■■□□ 2.2
TMEM260-207ENST00000555497 SNAP23O00161 211 aa28.77■■■□□ 2.2
TMEM260-207ENST00000555497 FAM173BQ6P4H8 233 aa28.77■■■□□ 2.2
TMEM260-207ENST00000555497 AGXT2Q9BYV1 514 aa28.77■■■□□ 2.2
TMEM260-207ENST00000555497 UBE2HP62256 183 aa28.76■■■□□ 2.19
TMEM260-207ENST00000555497 FGD1P98174 961 aa28.76■■■□□ 2.19
TMEM260-207ENST00000555497 APOBRQ0VD83 1088 aa28.76■■■□□ 2.19
TMEM260-207ENST00000555497 CHST3Q7LGC8 479 aa28.76■■■□□ 2.19
TMEM260-207ENST00000555497 NIP7Q9Y221 180 aaKnown RBP eCLIP28.76■■■□□ 2.19
TMEM260-207ENST00000555497 FGAP02671 866 aa28.75■■■□□ 2.19
TMEM260-207ENST00000555497 MROH5Q6ZUA9 1318 aa28.75■■■□□ 2.19
TMEM260-207ENST00000555497 NTSR2O95665 410 aa28.75■■■□□ 2.19
TMEM260-207ENST00000555497 PUM3Q15397 648 aaKnown RBP28.75■■■□□ 2.19
TMEM260-207ENST00000555497 PFKFB2O60825 505 aa28.74■■■□□ 2.19
TMEM260-207ENST00000555497 ARID4AP29374 1257 aaPredicted RBP28.74■■■□□ 2.19
TMEM260-207ENST00000555497 ADD2P35612 726 aa28.74■■■□□ 2.19
TMEM260-207ENST00000555497 HAND2P61296 217 aa28.74■■■□□ 2.19
TMEM260-207ENST00000555497 PARP10Q53GL7 1025 aa28.74■■■□□ 2.19
TMEM260-207ENST00000555497 SYAP1Q96A49 352 aaPredicted RBP28.74■■■□□ 2.19
TMEM260-207ENST00000555497 GPAA1O43292 621 aa28.74■■■□□ 2.19
TMEM260-207ENST00000555497 PDIA4P13667 645 aaKnown RBP28.74■■■□□ 2.19
TMEM260-207ENST00000555497 COL5A3P25940 1745 aaPredicted RBP28.74■■■□□ 2.19
TMEM260-207ENST00000555497 LPIN2Q92539 896 aa28.74■■■□□ 2.19
TMEM260-207ENST00000555497 SMARCC1Q92922 1105 aaPredicted RBP28.74■■■□□ 2.19
TMEM260-207ENST00000555497 KCNQ4P56696 695 aa28.73■■■□□ 2.19
TMEM260-207ENST00000555497 PPP1R9BQ96SB3 815 aa28.73■■■□□ 2.19
TMEM260-207ENST00000555497 ARAP2Q8WZ64 1704 aa28.72■■■□□ 2.19
TMEM260-207ENST00000555497 SLC9C2Q5TAH2 1124 aa28.72■■■□□ 2.19
TMEM260-207ENST00000555497 DDX11Q96FC9 970 aa28.72■■■□□ 2.19
TMEM260-207ENST00000555497 CTNNA3Q9UI47 895 aa28.72■■■□□ 2.19
TMEM260-207ENST00000555497 CTDNEP1O95476 244 aa28.71■■■□□ 2.19
TMEM260-207ENST00000555497 PTF1AQ7RTS3 328 aa28.71■■■□□ 2.19
TMEM260-207ENST00000555497 LINC00116Q8NCU8 138 aa28.71■■■□□ 2.19
TMEM260-207ENST00000555497 SMARCC2Q8TAQ2 1214 aa28.71■■■□□ 2.19
TMEM260-207ENST00000555497 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.71■■■□□ 2.19
TMEM260-207ENST00000555497 BCL9LQ86UU0 1499 aa28.7■■■□□ 2.19
TMEM260-207ENST00000555497 C8orf37Q96NL8 207 aa28.7■■■□□ 2.19
TMEM260-207ENST00000555497 GPHNQ9NQX3 736 aaPredicted RBP28.7■■■□□ 2.19
TMEM260-207ENST00000555497 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.7■■■□□ 2.19
TMEM260-207ENST00000555497 IDH1O75874 414 aaKnown RBP28.7■■■□□ 2.18
TMEM260-207ENST00000555497 CCDC173Q0VFZ6 552 aa28.7■■■□□ 2.18
TMEM260-207ENST00000555497 TTC6Q86TZ1 520 aa28.7■■■□□ 2.18
TMEM260-207ENST00000555497 NSUN7Q8NE18 718 aaKnown RBP28.7■■■□□ 2.18
TMEM260-207ENST00000555497 MPHOSPH8Q99549 860 aa28.7■■■□□ 2.18
TMEM260-207ENST00000555497 COL4A1P02462 1669 aa28.69■■■□□ 2.18
TMEM260-207ENST00000555497 CCT2P78371 535 aaKnown RBP28.69■■■□□ 2.18
TMEM260-207ENST00000555497 TTF1Q15361 905 aaPredicted RBP28.69■■■□□ 2.18
TMEM260-207ENST00000555497 IMMTQ16891 758 aaKnown RBP28.69■■■□□ 2.18
TMEM260-207ENST00000555497 UQCRFS1P1P0C7P4 283 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms