RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 TMOD3Q9NYL9 352 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 SALL1Q9NSC2 1324 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 LAMA4Q16363 1823 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 XIRP1Q702N8 1843 aaKnown RBP11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 UQCRHP07919 91 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 EVCP57679 992 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 GLIPR1L2Q4G1C9 344 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 CCDC9Q9Y3X0 531 aaKnown RBP11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 ABCA3Q99758 1704 aa11.69□□□□□ -0.54
RPGRIP1-208ENST00000555489 DHX16O60231 1041 aaKnown RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 NR1I2O75469 434 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 APOBRQ0VD83 1088 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 IMMTQ16891 758 aaKnown RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 DNTTIP2Q5QJE6 756 aaKnown RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZBTB38Q8NAP3 1195 aaPredicted RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 PGBD1Q96JS3 809 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 LRRC2Q9BYS8 371 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 PDCL3Q9H2J4 239 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 STARD3NLO95772 234 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 CSF1RP07333 972 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 IFIT5Q13325 482 aaKnown RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 MTERF4Q7Z6M4 381 aaKnown RBP11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 RCOR1Q9UKL0 485 aa11.68□□□□□ -0.54
RPGRIP1-208ENST00000555489 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 CTDNEP1O95476 244 aa11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 PDIA3P30101 505 aaKnown RBP11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 CKAP2LQ8IYA6 745 aa11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 APPBP2Q92624 585 aa11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 XAGE2Q96GT9 111 aa11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 PUS3Q9BZE2 481 aaKnown RBP11.67□□□□□ -0.54
RPGRIP1-208ENST00000555489 M0R2C6 588 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 AP5Z1O43299 807 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 EVA1CP58658 441 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZSCAN25Q6NSZ9 544 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 RGS22Q8NE09 1264 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 OSBP2Q969R2 916 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 CBX8Q9HC52 389 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 SLAIN2Q9P270 581 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 WDR19Q8NEZ3 1342 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 MYH15Q9Y2K3 1946 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZNF165P49910 485 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 LUZP1Q86V48 1076 aa11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 ZNF830Q96NB3 372 aaPredicted RBP11.66□□□□□ -0.54
RPGRIP1-208ENST00000555489 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
RPGRIP1-208ENST00000555489 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
RPGRIP1-208ENST00000555489 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.54
RPGRIP1-208ENST00000555489 MAP3K15Q6ZN16 1313 aa11.65□□□□□ -0.54
RPGRIP1-208ENST00000555489 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.55
RPGRIP1-208ENST00000555489 SLFNL1Q499Z3 407 aa11.65□□□□□ -0.55
RPGRIP1-208ENST00000555489 MYRIPQ8NFW9 859 aa11.65□□□□□ -0.55
RPGRIP1-208ENST00000555489 NCOA7Q8NI08 942 aa11.65□□□□□ -0.55
RPGRIP1-208ENST00000555489 UBE2Q2Q8WVN8 375 aa11.65□□□□□ -0.55
RPGRIP1-208ENST00000555489 STRN4Q9NRL3 753 aa11.65□□□□□ -0.55
RPGRIP1-208ENST00000555489 KINO60870 393 aaKnown RBP11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 FAM160A1Q05DH4 1040 aa11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 ATP2B3Q16720 1220 aa11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 RALYLQ86SE5 291 aaKnown RBP11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 PLA2G4DQ86XP0 818 aa11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 NAP1L2Q9ULW6 460 aaPredicted RBP11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 ATRNO75882 1429 aa11.64□□□□□ -0.55
RPGRIP1-208ENST00000555489 FGAP02671 866 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 CDC25BP30305 580 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 ADORA1P30542 326 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 STX1AQ16623 288 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 USP28Q96RU2 1077 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 NCOA5Q9HCD5 579 aaKnown RBP11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 RIC1Q4ADV7 1423 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 GOLGA6L19H0YKK7 550 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 ZNF213O14771 459 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 FOXP2O15409 715 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 PRC1O43663 620 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 ZAP70P43403 619 aa11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 CHAF1AQ13111 956 aaPredicted RBP11.63□□□□□ -0.55
RPGRIP1-208ENST00000555489 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms