RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
EFCAB11-206ENST00000555430 HMX2A2RU54 273 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 J3QW42 95 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 PRMT3O60678 531 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 MMP20O60882 483 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 BRD2P25440 801 aaKnown RBP5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 SOX18P35713 384 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 COL19A1Q14993 1142 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 ETFBKMTQ8IXQ9 262 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 DCAF11Q8TEB1 546 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 COL26A1Q96A83 441 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 PLD4Q96BZ4 506 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 SAP130Q9H0E3 1048 aa5.58□□□□□ -1.52
EFCAB11-206ENST00000555430 GHRHP01286 108 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 UVSSAQ2YD98 709 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 C16orf46Q6P387 395 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 TTLL10Q6ZVT0 673 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 NLRP13Q86W25 1043 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 AGGF1Q8N302 714 aaeCLIP5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 TOX2Q96NM4 488 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 NSUN5Q96P11 429 aaKnown RBP5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 PIM2Q9P1W9 311 aa5.57□□□□□ -1.52
EFCAB11-206ENST00000555430 SRPK2P78362 688 aaKnown RBP5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 TRIP4Q15650 581 aaPredicted RBP5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 MSMPQ1L6U9 139 aa5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 GDF6Q6KF10 455 aaPredicted RBP5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 NFXL1Q6ZNB6 911 aa5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 STK32AQ8WU08 396 aa5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 UTP4Q969X6 686 aaKnown RBP5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 CEP41Q9BYV8 373 aa5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 RBSNQ9H1K0 784 aa5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 SRA1Q9HD15 236 aaKnown RBP5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 CXXC1Q9P0U4 656 aaPredicted RBP5.56□□□□□ -1.52
EFCAB11-206ENST00000555430 BIN1O00499 593 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 TNFRSF10BO14763 440 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 FAM26DQ5JW98 314 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 CILP2Q8IUL8 1156 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 SIAH1Q8IUQ4 282 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 MAP4K3Q8IVH8 894 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 CACTIN-AS1Q8N1I8 211 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 IL22RA1Q8N6P7 574 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 BHLHE22Q8NFJ8 381 aaPredicted RBP5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 FAM13BQ9NYF5 915 aa5.55□□□□□ -1.52
EFCAB11-206ENST00000555430 WDR64B1ANS9 1081 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 UBAP1LF5GYI3 381 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 ATG7O95352 703 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 OR13H1Q8NG92 308 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 ZSCAN18Q8TBC5 510 aaPredicted RBP5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 PIK3R5Q8WYR1 880 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 TRIM33Q9UPN9 1127 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 CARMIL2Q6F5E8 1435 aa5.54□□□□□ -1.52
EFCAB11-206ENST00000555430 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 SETDB1Q15047 1291 aa5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 CAPN12Q6ZSI9 719 aa5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 CLEC10AQ8IUN9 316 aa5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 MKNK1Q9BUB5 465 aa5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 MUC3BQ9H195 1237 aa5.53□□□□□ -1.52
EFCAB11-206ENST00000555430 ZAP70P43403 619 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 HYAL2Q12891 473 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 NAA30Q147X3 362 aaPredicted RBP5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 TMEM164Q5U3C3 297 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 DBX2Q6ZNG2 339 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 CLP1Q92989 425 aaKnown RBP5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 MYRFLQ96LU7 910 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 FAM83CQ9BQN1 747 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 LMCD1Q9NZU5 365 aa5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 FNDC3AQ9Y2H6 1198 aaKnown RBP5.52□□□□□ -1.53
EFCAB11-206ENST00000555430 CFPP27918 469 aa5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 COL13A1Q5TAT6 717 aaPredicted RBP5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 TTC39BQ5VTQ0 682 aaPredicted RBP5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 FAM46AQ96IP4 442 aaKnown RBP5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 STIM2Q9P246 746 aa5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 LEMD3Q9Y2U8 911 aa5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 PPME1Q9Y570 386 aa5.51□□□□□ -1.53
EFCAB11-206ENST00000555430 FOSL1P15407 271 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 ATP11AP98196 1134 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 C1QL4Q86Z23 238 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 ABTB2Q8N961 1025 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 GIMAP7Q8NHV1 300 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 GPR152Q8TDT2 470 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 SPACA7Q96KW9 195 aa5.5□□□□□ -1.53
EFCAB11-206ENST00000555430 ZBTB39O15060 712 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 KIF4AO95239 1232 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 CDC27P30260 824 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 SCNN1AP37088 669 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 CEP135Q66GS9 1140 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 GALNT11Q8NCW6 608 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 FAM84AQ96KN4 292 aa5.49□□□□□ -1.53
EFCAB11-206ENST00000555430 LINC01387J3KSC0 135 aa5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 CPSF6Q16630 551 aaKnown RBP eCLIP5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 FAM20CQ8IXL6 584 aa5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 LRRC56Q8IYG6 542 aaPredicted RBP5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 FLCNQ8NFG4 579 aa5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 TMEM40Q8WWA1 233 aa5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 PBXIP1Q96AQ6 731 aa5.48□□□□□ -1.53
EFCAB11-206ENST00000555430 LACRTQ9GZZ8 138 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms