RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 EYA3Q99504 573 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 ZC3H12CQ9C0D7 883 aaKnown RBP12.19□□□□□ -0.46
PSEN1-213ENST00000555386 DBNDD1Q9H9R9 158 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 ZNF804BA4D1E1 1349 aa12.19□□□□□ -0.46
PSEN1-213ENST00000555386 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
PSEN1-213ENST00000555386 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.46
PSEN1-213ENST00000555386 MTX1Q13505 466 aa12.18□□□□□ -0.46
PSEN1-213ENST00000555386 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
PSEN1-213ENST00000555386 RTFDC1Q9BY42 306 aaPredicted RBP12.18□□□□□ -0.46
PSEN1-213ENST00000555386 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
PSEN1-213ENST00000555386 COL4A5P29400 1685 aa12.18□□□□□ -0.46
PSEN1-213ENST00000555386 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
PSEN1-213ENST00000555386 MROH5Q6ZUA9 1318 aa12.18□□□□□ -0.46
PSEN1-213ENST00000555386 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
PSEN1-213ENST00000555386 TXNRD3Q86VQ6 643 aa12.17□□□□□ -0.46
PSEN1-213ENST00000555386 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
PSEN1-213ENST00000555386 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
PSEN1-213ENST00000555386 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-213ENST00000555386 EXOC6BQ9Y2D4 811 aa12.17□□□□□ -0.46
PSEN1-213ENST00000555386 GJA3Q9Y6H8 435 aa12.17□□□□□ -0.46
PSEN1-213ENST00000555386 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
PSEN1-213ENST00000555386 TFCP2Q12800 502 aa12.16□□□□□ -0.46
PSEN1-213ENST00000555386 SSH3Q8TE77 659 aa12.16□□□□□ -0.46
PSEN1-213ENST00000555386 LEMD3Q9Y2U8 911 aa12.16□□□□□ -0.46
PSEN1-213ENST00000555386 ECE2O60344 883 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 HMMRO75330 724 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 RAD17O75943 681 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 IL15P40933 162 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-213ENST00000555386 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
PSEN1-213ENST00000555386 POLA2Q14181 598 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 SIRT2Q8IXJ6 389 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 KCNQ5Q9NR82 932 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 ZNF541Q9H0D2 1346 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 SCN9AQ15858 1988 aa12.15□□□□□ -0.46
PSEN1-213ENST00000555386 CIAO1O76071 339 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 PDE8BO95263 885 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 GYG1P46976 350 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 RPAP2Q8IXW5 612 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-213ENST00000555386 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-213ENST00000555386 JAG2Q9Y219 1238 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-213ENST00000555386 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 DDNO94850 711 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-213ENST00000555386 PUM3Q15397 648 aaKnown RBP12.14□□□□□ -0.47
PSEN1-213ENST00000555386 ATP2B3Q16720 1220 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 VPS37DQ86XT2 251 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 VGLL2Q8N8G2 317 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 NEUROD6Q96NK8 337 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
PSEN1-213ENST00000555386 SASH1O94885 1247 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 SLC5A1P13866 664 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 TIMM10P62072 90 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 VPS33BQ9H267 617 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 MED23Q9ULK4 1368 aa12.13□□□□□ -0.47
PSEN1-213ENST00000555386 FZD9O00144 591 aa12.12□□□□□ -0.47
PSEN1-213ENST00000555386 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-213ENST00000555386 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
PSEN1-213ENST00000555386 ADORA1P30542 326 aa12.12□□□□□ -0.47
PSEN1-213ENST00000555386 BCAMP50895 628 aa12.12□□□□□ -0.47
PSEN1-213ENST00000555386 CXCL9Q07325 125 aa12.12□□□□□ -0.47
PSEN1-213ENST00000555386 ZNF804AQ7Z570 1209 aa12.12□□□□□ -0.47
PSEN1-213ENST00000555386 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
PSEN1-213ENST00000555386 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 PSMD14O00487 310 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 HIBADHP31937 336 aaKnown RBP12.11□□□□□ -0.47
PSEN1-213ENST00000555386 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 GORABQ5T7V8 394 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 LPIN2Q92539 896 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-213ENST00000555386 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
PSEN1-213ENST00000555386 GPBP1L1Q9HC44 474 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-213ENST00000555386 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-213ENST00000555386 A0A1B0GUL7 405 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 GLTPD2A6NH11 291 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 IGHDP01880 384 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 FGFR2P21802 821 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 GTF2IP78347 998 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-213ENST00000555386 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-213ENST00000555386 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 RWDD1Q9H446 243 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-213ENST00000555386 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 AKAP2Q9Y2D5 859 aa12.1□□□□□ -0.47
PSEN1-213ENST00000555386 SMARCA5O60264 1052 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-213ENST00000555386 TNIP1Q15025 636 aa12.09□□□□□ -0.47
PSEN1-213ENST00000555386 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
PSEN1-213ENST00000555386 XAGE2Q96GT9 111 aa12.09□□□□□ -0.47
PSEN1-213ENST00000555386 CCDC8Q9H0W5 538 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-213ENST00000555386 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
PSEN1-213ENST00000555386 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms