RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 CTSWP56202 376 aa16.13■□□□□ 0.17
TMEM253-205ENST00000555314 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
TMEM253-205ENST00000555314 COL4A1P02462 1669 aa16.13■□□□□ 0.17
TMEM253-205ENST00000555314 TM4SF4P48230 202 aa16.12■□□□□ 0.17
TMEM253-205ENST00000555314 STRIP1Q5VSL9 837 aa16.12■□□□□ 0.17
TMEM253-205ENST00000555314 PAPPA2Q9BXP8 1791 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 DACT2Q5SW24 774 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 TTLL11Q8NHH1 800 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 CFHR5Q9BXR6 569 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 COA1Q9GZY4 146 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
TMEM253-205ENST00000555314 NF2P35240 595 aa16.1■□□□□ 0.17
TMEM253-205ENST00000555314 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
TMEM253-205ENST00000555314 KSR2Q6VAB6 950 aa16.1■□□□□ 0.17
TMEM253-205ENST00000555314 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
TMEM253-205ENST00000555314 POLR2AP24928 1970 aaKnown RBP16.09■□□□□ 0.17
TMEM253-205ENST00000555314 ELL2O00472 640 aaPredicted RBP16.09■□□□□ 0.17
TMEM253-205ENST00000555314 APAF1O14727 1248 aa16.09■□□□□ 0.17
TMEM253-205ENST00000555314 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
TMEM253-205ENST00000555314 NEXNQ0ZGT2 675 aa16.09■□□□□ 0.17
TMEM253-205ENST00000555314 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
TMEM253-205ENST00000555314 MAP3K2Q9Y2U5 619 aa16.09■□□□□ 0.17
TMEM253-205ENST00000555314 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 WNT10BO00744 389 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 SREBF2Q12772 1141 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 NBPF9Q3BBW0 867 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 PRPF38BQ5VTL8 546 aaKnown RBP16.08■□□□□ 0.16
TMEM253-205ENST00000555314 ZNF296Q8WUU4 475 aaPredicted RBP16.08■□□□□ 0.16
TMEM253-205ENST00000555314 HDAC9Q9UKV0 1011 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 HPS5Q9UPZ3 1129 aa16.08■□□□□ 0.16
TMEM253-205ENST00000555314 PI4KAP2A4QPH2 592 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 SOX10P56693 466 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 ARMC9Q7Z3E5 817 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 APOBEC3FQ8IUX4 373 aaKnown RBP16.07■□□□□ 0.16
TMEM253-205ENST00000555314 PI4KAP1Q8N8J0 262 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 CCDC85AQ96PX6 553 aaPredicted RBP16.07■□□□□ 0.16
TMEM253-205ENST00000555314 PLA2G12BQ9BX93 195 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 ANKRD2Q9GZV1 360 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 GREM2Q9H772 168 aa16.07■□□□□ 0.16
TMEM253-205ENST00000555314 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
TMEM253-205ENST00000555314 UNCXA6NJT0 531 aa16.06■□□□□ 0.16
TMEM253-205ENST00000555314 H7C1W4 665 aa16.06■□□□□ 0.16
TMEM253-205ENST00000555314 INHBEP58166 350 aa16.06■□□□□ 0.16
TMEM253-205ENST00000555314 LDLRAD1Q5T700 205 aa16.06■□□□□ 0.16
TMEM253-205ENST00000555314 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
TMEM253-205ENST00000555314 ZBED3Q96IU2 234 aaPredicted RBP16.06■□□□□ 0.16
TMEM253-205ENST00000555314 TNRC18O15417 2968 aaPredicted RBP16.06■□□□□ 0.16
TMEM253-205ENST00000555314 GPR25O00155 361 aa16.05■□□□□ 0.16
TMEM253-205ENST00000555314 ALDH1A1P00352 501 aa16.05■□□□□ 0.16
TMEM253-205ENST00000555314 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
TMEM253-205ENST00000555314 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
TMEM253-205ENST00000555314 MOB2Q70IA6 237 aa16.05■□□□□ 0.16
TMEM253-205ENST00000555314 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
TMEM253-205ENST00000555314 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
TMEM253-205ENST00000555314 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
TMEM253-205ENST00000555314 NEURL1BA8MQ27 555 aa16.04■□□□□ 0.16
TMEM253-205ENST00000555314 TBC1D8O95759 1140 aa16.04■□□□□ 0.16
TMEM253-205ENST00000555314 IGHMBP2P38935 993 aaKnown RBP16.04■□□□□ 0.16
TMEM253-205ENST00000555314 TTLL5Q6EMB2 1281 aa16.04■□□□□ 0.16
TMEM253-205ENST00000555314 PSME4Q14997 1843 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 ZNF804BA4D1E1 1349 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 CSF1RP07333 972 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 PTPN12Q05209 780 aaKnown RBP16.03■□□□□ 0.16
TMEM253-205ENST00000555314 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 PRAMEF18Q5VWM3 479 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 C15orf52Q6ZUT6 534 aaKnown RBP16.03■□□□□ 0.16
TMEM253-205ENST00000555314 TSPYL6Q8N831 410 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 MTMR14Q8NCE2 650 aa16.03■□□□□ 0.16
TMEM253-205ENST00000555314 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
TMEM253-205ENST00000555314 FKTNO75072 461 aa16.02■□□□□ 0.16
TMEM253-205ENST00000555314 MAP3K11Q16584 847 aa16.02■□□□□ 0.16
TMEM253-205ENST00000555314 SPRYD7Q5W111 196 aa16.02■□□□□ 0.16
TMEM253-205ENST00000555314 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.16
TMEM253-205ENST00000555314 TXNRD3Q86VQ6 643 aa16.02■□□□□ 0.16
TMEM253-205ENST00000555314 PPP2R3BQ9Y5P8 575 aa16.02■□□□□ 0.16
TMEM253-205ENST00000555314 MANSC4A6NHS7 340 aaPredicted RBP16.01■□□□□ 0.15
TMEM253-205ENST00000555314 ITGA6P23229 1130 aa16.01■□□□□ 0.15
TMEM253-205ENST00000555314 GCKRQ14397 625 aa16.01■□□□□ 0.15
TMEM253-205ENST00000555314 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
TMEM253-205ENST00000555314 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
TMEM253-205ENST00000555314 MXD3Q9BW11 206 aa16.01■□□□□ 0.15
TMEM253-205ENST00000555314 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
TMEM253-205ENST00000555314 SASH1O94885 1247 aa16■□□□□ 0.15
TMEM253-205ENST00000555314 ZBTB48P10074 688 aaPredicted RBP16■□□□□ 0.15
TMEM253-205ENST00000555314 KIAA0825Q8IV33 1275 aa16■□□□□ 0.15
TMEM253-205ENST00000555314 LINS1Q8NG48 757 aa16■□□□□ 0.15
TMEM253-205ENST00000555314 DEFB129Q9H1M3 183 aa16■□□□□ 0.15
TMEM253-205ENST00000555314 IL16Q14005 1332 aa15.99■□□□□ 0.15
TMEM253-205ENST00000555314 PPP1R12BO60237 982 aaPredicted RBP15.99■□□□□ 0.15
TMEM253-205ENST00000555314 CASP7P55210 303 aa15.99■□□□□ 0.15
TMEM253-205ENST00000555314 FKBP1AP62942 108 aaKnown RBP15.99■□□□□ 0.15
TMEM253-205ENST00000555314 GTF2IP78347 998 aa15.99■□□□□ 0.15
TMEM253-205ENST00000555314 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
TMEM253-205ENST00000555314 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
TMEM253-205ENST00000555314 SLC10A4Q96EP9 437 aa15.99■□□□□ 0.15
TMEM253-205ENST00000555314 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
TMEM253-205ENST00000555314 KCNJ4P48050 445 aa15.98■□□□□ 0.15
TMEM253-205ENST00000555314 TWISTNBQ3B726 338 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms