RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 A0A1B0GUL7 405 aa17.59■□□□□ 0.41
CHD8-208ENST00000555301 G3V3G9 751 aa17.59■□□□□ 0.41
CHD8-208ENST00000555301 TNNI3KQ59H18 835 aa17.59■□□□□ 0.41
CHD8-208ENST00000555301 CAVIN4Q5BKX8 364 aa17.59■□□□□ 0.41
CHD8-208ENST00000555301 DCAF8Q5TAQ9 597 aa17.59■□□□□ 0.41
CHD8-208ENST00000555301 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
CHD8-208ENST00000555301 FPGT-TNNI3KV9GXZ4 949 aa17.59■□□□□ 0.41
CHD8-208ENST00000555301 SPEF2Q9C093 1822 aa17.58■□□□□ 0.41
CHD8-208ENST00000555301 IRS2Q9Y4H2 1338 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 PRELPP51888 382 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 TIMM10P62072 90 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 NIM1KQ8IY84 436 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 NEUROD6Q96NK8 337 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 COA1Q9GZY4 146 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
CHD8-208ENST00000555301 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.58■□□□□ 0.4
CHD8-208ENST00000555301 UTRNP46939 3433 aa17.57■□□□□ 0.4
CHD8-208ENST00000555301 FER1L6Q2WGJ9 1857 aa17.57■□□□□ 0.4
CHD8-208ENST00000555301 KLRK1P26718 216 aa17.57■□□□□ 0.4
CHD8-208ENST00000555301 TXNRD3Q86VQ6 643 aa17.57■□□□□ 0.4
CHD8-208ENST00000555301 VPS37DQ86XT2 251 aa17.57■□□□□ 0.4
CHD8-208ENST00000555301 IL1RAPL2Q9NP60 686 aa17.57■□□□□ 0.4
CHD8-208ENST00000555301 ZNF609O15014 1411 aa17.56■□□□□ 0.4
CHD8-208ENST00000555301 HIBADHP31937 336 aaKnown RBP17.56■□□□□ 0.4
CHD8-208ENST00000555301 PODNQ7Z5L7 613 aa17.56■□□□□ 0.4
CHD8-208ENST00000555301 EAF2Q96CJ1 260 aaPredicted RBP17.56■□□□□ 0.4
CHD8-208ENST00000555301 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
CHD8-208ENST00000555301 FAM84BQ96KN1 310 aaPredicted RBP17.56■□□□□ 0.4
CHD8-208ENST00000555301 ZC3H4Q9UPT8 1303 aaKnown RBP17.55■□□□□ 0.4
CHD8-208ENST00000555301 ECE2O60344 883 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 IFIT2P09913 472 aaKnown RBP17.55■□□□□ 0.4
CHD8-208ENST00000555301 GYG1P46976 350 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 DOK7Q18PE1 504 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 FBXO33Q7Z6M2 555 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 AACSQ86V21 672 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 CCDC136Q96JN2 1154 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 DBNDD1Q9H9R9 158 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 PPP4R2Q9NY27 417 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
CHD8-208ENST00000555301 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
CHD8-208ENST00000555301 CD209Q9NNX6 404 aa17.54■□□□□ 0.4
CHD8-208ENST00000555301 GNL3LQ9NVN8 582 aaKnown RBP17.54■□□□□ 0.4
CHD8-208ENST00000555301 FZD9O00144 591 aa17.53■□□□□ 0.4
CHD8-208ENST00000555301 SMARCA5O60264 1052 aaPredicted RBP17.53■□□□□ 0.4
CHD8-208ENST00000555301 IL1R1P14778 569 aa17.53■□□□□ 0.4
CHD8-208ENST00000555301 ADORA1P30542 326 aa17.53■□□□□ 0.4
CHD8-208ENST00000555301 BCAMP50895 628 aa17.53■□□□□ 0.4
CHD8-208ENST00000555301 EIF6P56537 245 aaKnown RBP17.53■□□□□ 0.4
CHD8-208ENST00000555301 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
CHD8-208ENST00000555301 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
CHD8-208ENST00000555301 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
CHD8-208ENST00000555301 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
CHD8-208ENST00000555301 ZBTB22O15209 634 aa17.52■□□□□ 0.4
CHD8-208ENST00000555301 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
CHD8-208ENST00000555301 B4GALNT3Q6L9W6 998 aa17.52■□□□□ 0.4
CHD8-208ENST00000555301 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
CHD8-208ENST00000555301 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
CHD8-208ENST00000555301 SEMA3EO15041 775 aa17.51■□□□□ 0.39
CHD8-208ENST00000555301 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
CHD8-208ENST00000555301 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
CHD8-208ENST00000555301 NUCB1Q02818 461 aa17.51■□□□□ 0.39
CHD8-208ENST00000555301 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
CHD8-208ENST00000555301 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 YDJCA8MPS7 323 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 PHKA1P46020 1223 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 TNIP1Q15025 636 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 CHD1LQ86WJ1 897 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
CHD8-208ENST00000555301 COL4A5P29400 1685 aa17.5■□□□□ 0.39
CHD8-208ENST00000555301 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 CIAPIN1Q6FI81 312 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 GPATCH3Q96I76 525 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
CHD8-208ENST00000555301 DENND2AQ9ULE3 1009 aa17.49■□□□□ 0.39
CHD8-208ENST00000555301 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
CHD8-208ENST00000555301 CXCL9Q07325 125 aa17.48■□□□□ 0.39
CHD8-208ENST00000555301 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
CHD8-208ENST00000555301 LNPKQ9C0E8 428 aa17.48■□□□□ 0.39
CHD8-208ENST00000555301 RAD17O75943 681 aa17.47■□□□□ 0.39
CHD8-208ENST00000555301 GTF2IP78347 998 aa17.47■□□□□ 0.39
CHD8-208ENST00000555301 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
CHD8-208ENST00000555301 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
CHD8-208ENST00000555301 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
CHD8-208ENST00000555301 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
CHD8-208ENST00000555301 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
CHD8-208ENST00000555301 C16orf71Q8IYS4 520 aaPredicted RBP17.46■□□□□ 0.39
CHD8-208ENST00000555301 GPC2Q8N158 579 aa17.46■□□□□ 0.39
CHD8-208ENST00000555301 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHD8-208ENST00000555301 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
CHD8-208ENST00000555301 FBXW7Q969H0 707 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms