RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 M0R2C6 588 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 ST18O60284 1047 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 HSP90B1P14625 803 aaKnown RBP10.73□□□□□ -0.69
TDP1-210ENST00000554976 RAB3GAP1Q15042 981 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 MCMDC2Q4G0Z9 681 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 CNNM1Q9NRU3 951 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 CCDC88AQ3V6T2 1871 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 ZAP70P43403 619 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 TAF7LQ5H9L4 462 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 CCDC129Q6ZRS4 1044 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 CLEC17AQ6ZS10 378 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 NYXQ9GZU5 481 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 DLEC1Q9Y238 1755 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 CDK5RAP2Q96SN8 1893 aa10.73□□□□□ -0.69
TDP1-210ENST00000554976 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 TCRBV5S4A2TA0A5A2 114 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 FAM177BA6PVY3 158 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 RNF113AO15541 343 aaKnown RBP10.72□□□□□ -0.69
TDP1-210ENST00000554976 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 TTC39AQ5SRH9 613 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 PI16Q6UXB8 463 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 BSDC1Q9NW68 430 aaPredicted RBP10.72□□□□□ -0.69
TDP1-210ENST00000554976 MYH15Q9Y2K3 1946 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 GYS1P13807 737 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 PHKA1P46020 1223 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 MCM2P49736 904 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 NEK4P51957 841 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 CHRNDQ07001 517 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 TMX3Q96JJ7 454 aa10.72□□□□□ -0.69
TDP1-210ENST00000554976 PLSCR1O15162 318 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 TRIM37O94972 964 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 NFIXQ14938 502 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 TRAPPC3LQ5T215 181 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.69
TDP1-210ENST00000554976 DSCC1Q9BVC3 393 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.69
TDP1-210ENST00000554976 DUOX1Q9NRD9 1551 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 FRAT2O75474 233 aaPredicted RBP10.71□□□□□ -0.69
TDP1-210ENST00000554976 ST3GAL1Q11201 340 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 RUFY3Q7L099 469 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 CELF1Q92879 486 aaKnown RBP10.71□□□□□ -0.69
TDP1-210ENST00000554976 OSBP2Q969R2 916 aa10.71□□□□□ -0.69
TDP1-210ENST00000554976 PIH1D3Q9NQM4 214 aaKnown RBP10.71□□□□□ -0.69
TDP1-210ENST00000554976 ZPR1O75312 459 aa10.71□□□□□ -0.7
TDP1-210ENST00000554976 VPS53Q5VIR6 699 aa10.71□□□□□ -0.7
TDP1-210ENST00000554976 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.7
TDP1-210ENST00000554976 SETDB2Q96T68 719 aa10.71□□□□□ -0.7
TDP1-210ENST00000554976 SNAP23O00161 211 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 NBR1Q14596 966 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 ZGPATQ8N5A5 531 aaKnown RBP10.7□□□□□ -0.7
TDP1-210ENST00000554976 HELBQ8NG08 1087 aaPredicted RBP10.7□□□□□ -0.7
TDP1-210ENST00000554976 HMG20BQ9P0W2 317 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 FOCADQ5VW36 1801 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 ADD2P35612 726 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 AK2P54819 239 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 ZNF827Q17R98 1081 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 INTS4Q96HW7 963 aaKnown RBP10.7□□□□□ -0.7
TDP1-210ENST00000554976 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
TDP1-210ENST00000554976 MINPP1Q9UNW1 487 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
TDP1-210ENST00000554976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 WTIPA6NIX2 430 aaPredicted RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 IGHMBP2P38935 993 aaKnown RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 RASGRF1Q13972 1273 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 TXNRD1Q16881 649 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 STOX1Q6ZVD7 989 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 CDC5LQ99459 802 aaKnown RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 ZFYP08048 801 aaPredicted RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 CYP21A2P08686 494 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 UQCRFS1P1P0C7P4 283 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 HSPD1P10809 573 aaKnown RBP10.69□□□□□ -0.7
TDP1-210ENST00000554976 SLC5A1P13866 664 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
TDP1-210ENST00000554976 A0A0G2JLW4 131 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 CPA1P15085 419 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 RFC4P35249 363 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 PRR5LQ6MZQ0 368 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 PUS7LQ9H0K6 701 aaKnown RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 PHF14O94880 888 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 LARGE1O95461 756 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 CASTP20810 708 aaKnown RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 DDR1Q08345 913 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 NBPF5PQ86XG9 351 aaPredicted RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 APPBP2Q92624 585 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 TNPO1Q92973 898 aaKnown RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 MPHOSPH8Q99549 860 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 KIF13BQ9NQT8 1826 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 PDS5AQ29RF7 1337 aaKnown RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 POLRMTO00411 1230 aaKnown RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 TOB2Q14106 344 aaPredicted RBP10.68□□□□□ -0.7
TDP1-210ENST00000554976 TPTE2Q6XPS3 522 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 SLC51AQ86UW1 340 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 ANKRD18AQ8IVF6 992 aa10.68□□□□□ -0.7
TDP1-210ENST00000554976 SPATA5Q8NB90 893 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms